Pseudonocardia dioxanivorans: Psed_3953
Help
Entry
Psed_3953 CDS
T01479
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdx03016
]
Psed_3953
Enzymes [BR:
pdx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Psed_3953
Transfer RNA biogenesis [BR:
pdx03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Psed_3953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AEA26119
UniProt:
F4CPT6
LinkDB
All DBs
Position
complement(4234648..4236120)
Genome browser
AA seq
490 aa
AA seq
DB search
MTRSYTIRTYGCQMNVHDSERMAGLLESAGYVRAEATDDADVVVLNTCAVRENADNKLYG
NLGHLAPRKAARPGMQIAVGGCLAQKDRDTIVAKAPWVDVVFGTHNVGALPTLLERARHN
ERAEVEIRESLEVFPSTLPARRESAYAGWVSISVGCNNTCTFCIVPSLRGKERDRRPGDV
LAEVSALAADGVLEVTLLGQNVNAYGVEFGDREAFSKLLRACGDVEGLERVRFTSPHPRE
FSSDVIAAMAETPNVCPQLHMPLQSGSDRVLREMRRSYRSSRFLAILDEVRGSIPDAAIS
TDIIVGFPGETEEDFRATLDVVERARFAQAFTFQYSPRPGTPAATLPDQLPKAVVQERYE
RLVELQERISWEQNRALEGRVVEVLVSTGEGRKDSATRRLSGRARDGRLVHFAPGAAPVR
PGDVVTVRVGYGAPHHLVADDGLLSHRRTRAGDAFEAGTRPGGAPTGLGLPGFGAPPPAP
AVAACSTAGA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgcagctacaccatccgcacctacgggtgccagatgaacgtgcacgactccgag
cggatggcgggtctgctcgagtcggcaggctacgtccgcgccgaggcgaccgacgacgcc
gacgtcgtcgtcctcaacacgtgcgcggtgcgcgagaacgccgacaacaagctctacggc
aacctggggcacctggcgccgcgcaaggccgccaggccgggcatgcagatcgccgtcggc
ggctgcctggcgcagaaggaccgcgacacgatcgtcgcgaaggccccgtgggtcgacgtc
gtcttcggcacccacaacgtcggggcgctgcccacgctgctggaacgggcgaggcacaac
gagcgcgccgaggtcgagatccgcgagtcgctggaggtcttcccgtcgacgctgccggcg
cggcgcgagtcggcctacgccggctgggtgtcgatctcggtgggctgcaacaacacatgc
acgttctgcatcgtgccgtcgttgcgcggcaaggagcgcgaccgccgccccggcgacgtc
ctcgccgaggtgtcggcgctcgccgccgacggcgtgctcgaggtgaccctgctgggccag
aacgtcaacgcgtacggcgtcgagttcggcgaccgcgaggcgttctcgaagctgttgcgc
gcctgcggcgacgtcgaggggctggagcgcgtccggttcacctcgccgcacccgcgcgag
ttctcctccgacgtcatcgccgcgatggccgagacgcccaacgtgtgcccccagctgcac
atgccgctgcagtcggggtcggaccgggtgctgcgcgagatgcgccgctcctaccggtcc
tcgcggttcctcgcgatcctcgacgaggtgcgcgggtcgatccccgacgccgcgatcagc
accgacatcatcgtcggcttccccggtgagaccgaggaggacttccgcgccacgctcgac
gtcgtggaacgcgcccgcttcgcgcaggccttcaccttccagtactcgccgcggcccggc
acccccgccgcgacgctgcccgaccagctgcccaaggccgtcgtccaggagcgctacgag
cgcctcgtggagctgcaggaacggatctcctgggagcagaaccgggcgctcgagggtcgc
gtggtcgaggtgctggtctcgacgggggagggccgcaaggactcggccacccggcggctg
tccggccgcgcccgcgacggccggctggtgcacttcgcccccggcgcggcgccggtgcgc
ccgggcgacgtcgtgaccgtgcgcgtcgggtacggcgcgccgcaccacctcgtcgccgac
gacgggctgctgtcgcaccggcgcacccgcgcaggcgacgcgttcgaggcgggtacccgt
cccggtggcgccccgacgggcctgggacttccggggttcggagcgcccccgccggccccc
gccgtcgcggcgtgctcgacggccggggcgtga
DBGET
integrated database retrieval system
