Pseudonocardia dioxanivorans: Psed_3979
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Entry
Psed_3979 CDS
T01479
Name
(GenBank) hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00020
Citrate cycle (TCA cycle)
pdx00620
Pyruvate metabolism
pdx00720
Other carbon fixation pathways
pdx01100
Metabolic pathways
pdx01110
Biosynthesis of secondary metabolites
pdx01120
Microbial metabolism in diverse environments
pdx01200
Carbon metabolism
Module
pdx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pdx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Psed_3979
00620 Pyruvate metabolism
Psed_3979
09102 Energy metabolism
00720 Other carbon fixation pathways
Psed_3979
Enzymes [BR:
pdx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Psed_3979
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fumerase_C
Fumerase
DUF1236
PhyR_sigma-like
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
AEA26145
UniProt:
F4CPW2
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All DBs
Position
4265099..4266754
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AA seq
551 aa
AA seq
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MPEFHHIDVLPLGPDDTEYRRLDLEPGTVVESPQLGRTFLQVDPATITALVKQAVTDIQH
QLRPSHLAQLRAIVDDPEASANDRFVATDLLRNACVSAGGVLPMCQDTGTAIVVGKRTET
VLTGGDDERAISRGIYEAYDELNLRYSQMAPTSFWDEKNTGTNLPAQVELYSAPGEQPKY
EFLVMAKGGGSANKTFLYQETKALLNPAKLARFLDEKLRSLGTAACPPYHLAIVVGGMSA
EYTLKVAKLASARYLDTLPATGSGDGSAYRDRDLEQQVLELTRNFGIGAQFGGKYFCHDV
RVIRLPRHGASLPVGIAVSCSADRQAKAKITADGVFLEQLERDPARFLPDTESEDLSDEV
VRIDLTRPMDEIRAQLSQLPVKTRVSLTGPLVVARDIAHAKIAERLEAGEPMPQYMRDHP
VYYAGPAKTPDGYASGSFGPTTAGRMDSYVAQFQAAGGSLVMLAKGNRSQQVTDACAAHG
GFYLGSIGGPAARLAQDCIRKVDVLEYPELGMEAVWKIEVEDFPAFVVVDDKGNDFFAST
SQPTLQVGFRR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttccaccacatcgacgtgctcccgctcggcccggacgacaccgagtaccgc
cgtctcgacctcgagcccggcaccgtcgtcgagtccccccagctcggccggaccttcctg
caggtcgaccccgccacgatcaccgcgctggtcaagcaggcggtcaccgacatccagcac
cagctgcggccctcgcacctggcccagctgcgcgccatcgtcgacgacccggaggcctcg
gccaacgaccggttcgtcgcgacggacctgctgcgcaacgcctgcgtctccgccggcggg
gtgctgccgatgtgccaggacaccggcacggcgatcgtcgtcggcaagcggaccgagacc
gtactgaccggcggggacgacgaacgcgccatctcccgcggcatctacgaggcctacgac
gagctcaacctgcgctactcgcagatggcgccgacgtcgttctgggacgagaagaacacg
ggcaccaacctgcccgcacaggtcgagctgtactccgcgccgggcgagcagcccaagtac
gagttcctggtgatggccaagggcggcggctcggccaacaagaccttcctctaccaggag
accaaggcgctgctgaacccggcgaaactggcgcggttcctcgacgagaagctccgctcg
ctcggcaccgcggcctgcccgccctaccacctcgcgatcgtcgtcggcgggatgtcggcg
gagtacacgctgaaggtcgcgaagctggcgtccgcgcgctacctggacacgctgcccgcc
acgggctccggcgacggctcggcctaccgcgaccgcgacctcgagcagcaggtcctcgag
ctgacccgcaacttcgggatcggcgcccagttcggcggcaagtacttctgccacgacgtc
cgggtgatccggctgccccggcacggcgcgtcgctgcccgtcggcatcgccgtctcgtgc
tcggccgaccgccaggccaaggcgaagatcaccgccgacggcgtgttcctcgagcagctc
gagcgcgaccccgcccgcttcctgcccgacaccgagagcgaggacctgtccgacgaggtc
gtgcgtatcgacctgacccgcccgatggacgagatccgcgcgcagctctcgcagctgccg
gtcaagacccgggtgtcgctgacgggcccgctcgtcgtcgcgcgcgacatcgcgcacgcc
aagatcgccgagcgcctggaggccggcgagccgatgccgcagtacatgcgcgaccacccg
gtctactacgccgggccggcgaagacccccgacggctacgcctcgggctcgttcggcccg
acgacggccggccggatggactcctacgtcgcgcagttccaggcggcgggcgggtcgctc
gtcatgctggccaagggcaaccgctcgcagcaggtcaccgacgcctgcgccgcgcacggc
gggttctacctcggctcgatcggcggccccgccgcgcggctcgcgcaggactgcatccgc
aaggtcgacgtcctcgagtacccggagctgggcatggaggccgtctggaagatcgaggtc
gaggacttccccgcgttcgtcgtggtggacgacaagggcaacgacttcttcgcctcgacc
tcgcagccgaccctgcaggtgggtttccggcgctga
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