Pseudonocardia dioxanivorans: Psed_4172
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Entry
Psed_4172 CDS
T01479
Name
(GenBank) ABC-type sugar transport system periplasmic component-like protein
KO
K10439
ribose transport system substrate-binding protein
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx02010
ABC transporters
pdx02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Psed_4172
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Psed_4172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdx02000
]
Psed_4172
Transporters [BR:
pdx02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Psed_4172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AEA26335
UniProt:
F4CUM1
LinkDB
All DBs
Position
complement(4496254..4497429)
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AA seq
391 aa
AA seq
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MLSGTSMKRMATVGAAALMLTVVAACSSGGSSSGDAAAAGGGASCDLTAVNAALDKYSAV
PEYKEPGPAFDMSKAAGKTIFNIQESSANPFTQALTTSMTQAAEKVGMKVVDYPNQGDHT
QWIQGMNAAIAQKPDAITLTGGTISPTYFQPQAAAAKAAGIPIITVLNEDLTQPQGPEVT
ARVAQPYDLAARLSADFVIKDTNCAGNVLVLTSKEVIGSPASIDAINDEFKKYCPNCKLT
FQNVSVPDWSTQITNIVRSAIQTDPNLNYVVPLYDSMSQFVVPGIQLAGATGKVHISTFN
GTPFVLKMMQDADVVRMDVGENPAQVGYAVVDQVGRIISGAGPIASGDEGIQLRVFTKTN
VAEAGNPPELGKGYGDSFADSYLKLWGKAAG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctggcacgtccatgaaacggatggcgaccgtcggcgcggcggcgctgatgctg
accgtcgtcgccgcgtgctcgtcgggaggctcgtcctccggtgacgccgcggcggcgggc
gggggcgcctcgtgcgacctcaccgccgtcaacgccgcgctcgacaagtactcggcggtg
cccgagtacaaggagccgggcccggcgttcgacatgagcaaggccgccggcaagaccatc
ttcaacatccaggagtccagcgcgaacccgttcacgcaggccctgacgacgtcgatgacc
caggccgcggagaaggtcggcatgaaggtcgtcgactaccccaaccagggcgaccacacc
cagtggatccagggcatgaacgcggccatcgcgcagaagcccgacgccatcaccctcacc
ggcggcaccatcagcccgacctacttccagccgcaggccgcagcggcgaaggcggcgggg
atcccgatcatcaccgtcctcaacgaggacctcacccagccccagggacccgaggtcacc
gcgcgtgtcgcgcagccgtacgacctcgccgcccggctgtccgcggacttcgtcatcaag
gacaccaactgcgcgggcaacgtcctggtgctgacctcgaaggaggtcatcgggagcccg
gcctcgatcgacgcgatcaacgacgagttcaagaagtactgcccgaactgcaagctgacg
ttccagaacgtctcggtgccggactggtcgacgcagatcaccaacatcgtccgctcggcc
atccagaccgaccccaacctcaactacgtcgtgccgctctacgacagcatgtcgcagttc
gtggtgcccggcatccagctcgccggcgccaccggcaaggtgcacatctcgacgttcaac
ggcaccccgttcgtgctcaagatgatgcaggacgcggacgtcgtgcggatggacgtcggc
gagaacccggcgcaggtcgggtacgccgtcgtcgaccaggtcggccggatcatctccggc
gcgggcccgatcgcgtcgggtgacgagggcatccagctgcgggtcttcaccaagaccaac
gtcgccgaggccggcaacccgccggagctcggcaagggctacggcgactccttcgcggac
agctacctcaagctgtggggcaaggcggcgggctga
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