Pseudonocardia dioxanivorans: Psed_4623
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Entry
Psed_4623 CDS
T01479
Name
(GenBank) Ribosomal protein S12 methylthiotransferase rimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdx03009
]
Psed_4623
Enzymes [BR:
pdx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Psed_4623
Ribosome biogenesis [BR:
pdx03009
]
Prokaryotic type
ribosomal protein modification factors
Psed_4623
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AEA26772
UniProt:
F4D0H6
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All DBs
Position
complement(4956121..4957608)
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AA seq
495 aa
AA seq
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MPKPPPPESAPRRAALLTLGCARNEVDSEELAGRLAGSGWELVEADPSSGGPAPDVIVVN
TCGFVEQAKKDSIDTLLSASDVAQATGAKVVAVGCLAERYGAELAESLPEADAVLGFDAY
PELAERLGEVLGGHAPAPHVPVDRRTLLPLTPVARPTAAADVSVPGHEWVPDLSRVRLSD
GPVANLKLASGCDRRCAFCAIPSFRGAFVSRPPADVLAEAAWLAEQGVRELVLVSENSTS
YGKDLPGGTRALVDLLPRLAAVPGIERVRASYLQPAEMRPDLVSVIATTPGIAPYFDLSF
QHGSAAVLRRMRRFGGRTDFLELCERIRALAPEAGIRSNVIVGFPGETEDDLAELEAFLT
GARLDAVGVFGYSDEDGTEAAGYDGKIDPDEVQARVSRISSLVDELVAQRAEDRVGSEVV
VLVEQAEDDDFECTGRAAHQAPEVDGECVVERGSGLTAGELVRCVVVDTEGADLMVSPRE
VLPGGRAGLVAAGSA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaagcccccgccgcccgagtccgccccgcggcgtgctgccctgctcaccctgggg
tgtgcccgcaacgaggtcgactcggaggagctcgcgggccggctcgcgggcagcggctgg
gagctcgtggaggccgacccgtccagcggcggtccggcgcccgacgtcatcgtcgtcaac
acgtgcgggttcgtcgagcaggccaagaaggactcgatcgacacgctgctgtccgcgtcc
gacgtcgcgcaggccaccggggccaaggtcgtggccgtcggctgcctcgccgagcggtac
ggcgccgagctcgccgagagcctcccggaggccgacgcggtcctcggcttcgacgcctac
ccggagctggccgagcgcctcggtgaggtgctcggcggtcacgcgcccgcgccgcacgtc
ccggtcgaccggcggacgctgctgccgctcacgcccgtcgcccggcccacggccgccgcc
gacgtctcggtccccggccacgagtgggtgcccgacctgtcccgcgtgcggctgtccgac
gggcccgtcgccaacctcaagctcgcctcggggtgcgaccggcggtgcgcgttctgcgcg
atcccgtcgttccgcggcgcgttcgtctcccgcccgcccgccgacgtgctcgccgaggcg
gcctggctcgccgagcagggcgtccgcgagctcgtgctggtcagcgagaactcgacgtcg
tacggcaaggacctgcccggtggcacccgtgcgctggtcgacctgctcccgcggctcgcc
gccgtcccgggcatcgagcgggtccgcgcctcctacctgcagcccgccgagatgcggccc
gacctcgtctcggtcatcgcgacgacgcccggcatcgcgccgtacttcgacctctccttc
cagcacgggtccgctgccgtcctgcgccgcatgcggcgcttcggcggccgcaccgacttc
ctcgagctgtgcgagcgcatccgcgccctggctccggaggcgggcatccgcagcaacgtc
atcgtcggtttcccgggcgagaccgaggacgacctcgccgagctcgaggcgttcctcacc
ggcgcccggctcgacgccgtaggcgtcttcggctactccgacgaggacggcaccgaggcc
gcgggctacgacggcaagatcgaccccgacgaggtgcaggcccgggtgtcgcggatctcc
tcgctggtcgacgagctggtcgcgcagcgggccgaggaccgggtcgggtcggaggtcgtc
gtgctcgtcgagcaggccgaggacgacgacttcgagtgcaccgggcgcgccgcccaccag
gccccggaggtcgacggcgagtgcgtcgtcgaacgcgggtccgggctgacggccggtgag
ctggtgcgctgcgtcgtcgtcgacaccgagggcgccgacctgatggtgtccccgcgcgag
gtcctccccggcgggcgcgccgggctcgtcgcggcggggtcggcatga
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