Pseudonocardia dioxanivorans: Psed_4667
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Entry
Psed_4667 CDS
T01479
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdx03016
]
Psed_4667
Enzymes [BR:
pdx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Psed_4667
Transfer RNA biogenesis [BR:
pdx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Psed_4667
Prokaryotic type
Psed_4667
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AEA26815
UniProt:
F4D127
LinkDB
All DBs
Position
complement(5002864..5003760)
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AA seq
298 aa
AA seq
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MPGLVIVDKPAGFTSHDVVARLRRILRTRKVGHAGTLDPMATGVLVCGVDRGTKLLGHLA
LDTKAYTATIRLGVATTTDDAEGEPTGGADAAAVDEAAVRAGMAALTGAIEQRPSSVSAI
KVDGRRAYARVRAGEDVVLPARPVTVSEFTLDALRRGPGVTDLDVTVSCSSGTYVRALAR
DLGAGLGVGGHLTALRRTRVGPFTLEHARTLEDLEADPGLSLGLDDAVAVAFPRRDVDEA
AAADLSHGRPLPPAGLTGTYGVFAPDGHAVGLVADRDGSARPVVVLAPAGSGAATAGP
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggactcgtgatcgtcgacaagcccgcggggttcacctcccacgacgtggtggcc
cggctgcgccgcatcctgcgcacccgcaaggtcggccacgccggcacgctcgacccgatg
gccaccggcgtcctggtgtgcggcgtcgaccggggcaccaagctgctcggtcacctggcg
ctcgacaccaaggcctacacggccaccatccgcctgggggtcgcgaccaccaccgacgac
gccgagggcgagcccacggggggtgccgacgccgcggccgtcgacgaggccgccgtgcgg
gccgggatggccgcgctgaccggcgcgatcgagcagcgccccagctcggtgagcgccatc
aaggtcgacggcaggcgcgcctacgcccgggtccgtgcgggcgaggacgtcgtgctgccc
gcccgcccggtcaccgtctcggagttcaccctcgacgccttgcgccgcggccccggcgtc
acggacctggacgtcacggtgtcgtgctcgtcagggacctacgtccgggcgctggcccgc
gacctcggcgccgggctcggggtcggcgggcacctgacggcgttgcgccgcaccagggtc
gggccgttcacgctcgaacacgccaggaccctcgaggacctcgaggccgatccggggctg
tcactggggctcgacgacgccgtcgccgtcgcgttcccgcgtcgcgacgtcgacgaggcc
gccgcggccgacctctcgcacggccgcccgctgccgccggccgggctgaccggcacgtac
ggggtcttcgcgcccgacggtcacgcggtcggcctggtcgccgaccgggacggttcggca
cggcccgtcgtggtgctcgccccggccgggagcggggccgcgacggcgggtccgtag
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