Pseudonocardia dioxanivorans: Psed_5041
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Entry
Psed_5041 CDS
T01479
Name
(GenBank) protein of unknown function DUF853 NPT hydrolase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdx03400
]
Psed_5041
DNA repair and recombination proteins [BR:
pdx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Psed_5041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
FtsK_SpoIIIE
ResIII
AAA_30
CbiA
T2SSE
AAA_25
CHAD
AAA_6
Motif
Other DBs
NCBI-ProteinID:
AEA27179
UniProt:
F4CNF5
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Position
complement(5395768..5397330)
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AA seq
520 aa
AA seq
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MGENTNADPVTAAQQIASGYATEGLALELGTVLVDGAVDPSAKVRIPFATLNRHGLVAGA
TGTGKTKTLQCLAGQLSDAGVPVLLADVKGDLSGMARPGEDGPKIRSRAEDTGDDWTPTA
YPVEFLSLGAPSAAVPIRATLTQFGPILLSKVLDLNDTQESTLGLIFHWADQQQLPLLDT
KDLRAVIQHLTSDEGKADLKGIGGVSPATAGVILRALVNLEAQGGDHFFGEPEFDPADLI
RQVDGKGVVSLLELADQAANPKLFSTFLMWLLAELYEELPEAGDLDKPKLVFFFDEAHLL
FTDASKAFLERIEQTVKLIRSKGVGVFFCTQLPTDVPNAVLSQLGARIQHALRAFTPEDQ
KALARTVKTYPTSKVYDLEEALTSLGTGEAIVTVLSERGAPTPVAWARMRAPRSLMAAIG
EPAVTEAAKASPLYGRYGETVDRESAYEKLTAKIATPPPPEAVPVDAPPPPPQAPRRREK
EEPGMVAEVLGSPVVKSFLRSAASALGREITRGLFGTRRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgggggagaacacgaacgccgatccggtgaccgcggcccagcagatcgcgtccggctac
gccaccgaggggctcgcgctcgagctcggcacggtgctcgtcgacggggcggtcgacccg
tcggccaaggtgcgcatcccgttcgcgacgctgaaccggcacggtctggtcgcgggcgcc
accggcaccggcaagacgaagacgttgcagtgcctggccggccagctgtccgacgcgggt
gtcccggtgctgctcgccgacgtcaagggcgacctgtccggcatggcgaggcccggcgag
gacgggccgaagatccggtcgcgcgccgaggacaccggcgacgactggacgcccaccgcc
taccccgtcgagttcctctcgctcggggcgccgtcggccgccgtgccgatccgcgcgacc
ctgacccagttcggcccgatcctgctgtcgaaggtgctcgacctcaacgacacccaggag
tcgacgctcggcctgatcttccactgggccgaccagcagcagctgccgttgctcgacacc
aaggacctccgcgcggtcatccagcacctcacctccgacgagggcaaggccgacctcaag
ggcatcggcggcgtctcgcccgcgacggccggggtcatcctgcgcgccctggtcaacctc
gaggcgcagggcggggaccacttcttcggcgagcccgagttcgaccccgccgacctcatc
cgtcaggtcgacggcaagggcgtcgtctcgctgctcgagctcgccgaccaggccgccaac
cccaagctcttctcgacgttcctgatgtggctgctcgccgagctctacgaggagctcccc
gaggcgggcgacctcgacaagcccaagctcgtgttcttcttcgacgaggcgcacctgctg
ttcaccgacgcgtcgaaggcgttcctggagcgcatcgagcagaccgtgaagctcatccgg
tccaagggcgtcggggtgttcttctgcacccagctgcccaccgacgtccccaacgcggtg
ctctcgcagctcggtgcccggatccagcacgccctgcgcgccttcaccccggaggaccag
aaggcgctggcgcgcaccgtcaagacctacccgacgtcgaaggtctacgacctcgaggag
gcgctcacctcgctgggcaccggcgaggcgatcgtgaccgtgctgtcggagcgcggggcg
ccgacgcccgtcgcctgggcccggatgcgggccccgcgctcgctcatggcggcgatcggc
gagccggccgtcaccgaggccgccaaggcgtccccgttgtacggcaggtacggcgagacc
gtcgaccgtgagtcggcctacgagaagctcaccgcgaagatcgccacgccgccgcccccg
gaggccgtgcccgtcgacgccccgccgccgcccccgcaggccccgcggcgccgggagaag
gaggagccggggatggtcgccgaggtgctgggctcaccggtggtcaagtcgttcctgcgg
tccgcggccagcgcactgggccgcgagatcacccggggcctcttcggcacccggcggcgc
tga
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