Pseudonocardia dioxanivorans: Psed_5542
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Entry
Psed_5542 CDS
T01479
Name
(GenBank) transcriptional regulator, putative ATPase, winged helix family
Organism
pdx
Pseudonocardia dioxanivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTAD
AAA_16
TPR_12
AAA_22
AAA_17
AAA_28
ABC_tran
CoaE
Trans_reg_C
NirdL-like_HTH
TsaE
Motif
Other DBs
NCBI-ProteinID:
AEA27672
UniProt:
F4CYU7
LinkDB
All DBs
Position
complement(5902162..5905161)
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AA seq
999 aa
AA seq
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MSAVTPGVRFQLLGRFQVHREGAEVAPAAFGGRKVRTMLRVLAVHDGDLVPHDVLADALW
PQRLPADPPGNLGVLVNRARRAVGDPGVVLTGAGGYALGRCTVDVTEFLGHVAAARTTGP
GEALDRYRAALALWGEPLPEDAYADWAERVRDRLRRAHVEACEGAARAALAVGAPGDAAR
YAADAVAADPLRESSTLLLAEALAAVGDRAGALARLDELGRALGTELGVAPSDAVTSLRE
RLARKGVGVPSPGGRGRPRPAGEPVGRTAFVGRDDELGRLRAAVGAGRVVGLAGGAGAGK
SRLLAELARTLGVPVVAGQAYLAERTETWGLARSLLREAVSLDAGIVDTLPARVRDALAE
LLPELLPVPEGPPVVLDGETRRALLLAGGLRLLTAAGAPLLVDDLQWADPSSLALLGSVL
ARVPTLPAVLAFRPAEIDGDALDGIRHARGLPVMTLRPLGAAALERLVDDAALVRALTDG
TDGTPFAVVEVLRGLAAAGDVVQVGGRWRPTAPDAAGRAGELARAGQRRGIARRAARYRD
RDADLLALVAIAGREVPAGTVAAALGADGRDVLDRLAALAADGLLRLGDMGWATAHDLVA
ETVVAGLDRADRGRLHGLLARALEAAEADPSDVARHHREAGDTGAAALAYARAAASALDA
HATREAAALADAGLRLQPRGAVAAELHEYRAAARAAHGDIDGAAGDLRAALTGAPTDRSR
RRARLAMLSSGARDPWAAADLAELALVEAGDDPAARALALETAAILDMNLGRAERAAARS
EQALVLYQELGDGQGVARILDGRAMATFLDGRIAEGVELFGRVADLFAGSGDLLRVVTPR
STRGHGLVFLGRPEEGLAETDAALRLARELDSPEGVAYACWHRSEALSAAGRTDEAEATA
REALDVARALGHRGWTATAHRALGIALQTRGDLDGACAQFTESGRVAGDSLTLFASWAAA
RLAQIAVAQGREASDLVARARSIGPPLGHLEIPELTPSR
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgtgacgcccggtgtccggttccagctgctggggcgcttccaggtgcatcgc
gagggcgcggaggtggcgcccgcggcgttcggcggccgcaaggtccggacgatgttgcgc
gtgctcgccgtccacgacggcgacctcgtcccgcacgacgtgctcgccgacgcgctctgg
ccgcagcggctgccggccgacccgcccgggaacctcggcgtgctggtgaaccgggcccgg
cgcgcggtcggtgacccgggcgtcgtgctcaccggggcgggcgggtacgcgctgggccgc
tgcaccgtcgacgtcaccgagttcctcgggcacgtcgccgcggcccgcacgacggggccc
ggcgaggcgctcgaccgctaccgcgccgcgctcgcgctgtggggtgagccgctcccggag
gacgcctacgccgactgggccgaacgcgtccgcgaccggctgcggcgcgcacacgtcgag
gcctgcgagggcgccgcgcgcgcagcgctcgccgtcggcgctcccggcgacgcggcccgg
tacgccgccgacgcggtcgccgccgatccgttgcgcgagtcgtcgacgctcctgctggcc
gaggccctcgccgcggtcggggaccgggccggtgcgctcgcccgcctcgacgagctgggc
cgggcgctgggcacggagctgggggtggcaccgtcggacgcggtgacgtcgctgcgggaa
cgcctggcgcgcaagggcgtcggcgtgccgtcgcccggcgggcgggggcgcccgcgcccc
gcgggggagcccgtgggccggaccgccttcgtcgggcgcgacgacgagctcgggcggctg
cgcgcggccgtcggcgccgggcgcgtcgtggggctggccgggggagcgggtgcggggaag
tcgcggctgctcgccgagctggcgcggacgctcggggtccccgtcgtcgccgggcaggcc
tacctggccgagcgcacggagacgtggggtctcgcgcggtcgttgctgcgcgaggcggtg
tcgctggacgcggggatcgtcgacacgctgcccgcccgcgtccgcgacgccctcgccgag
ttgctgcccgagctcctgcccgtccccgagggcccgccggtggtcctggacggcgagacc
cggcgcgcactcctgctcgccggcgggctgcgcctgctgacggcggccggcgcgccgctg
ctcgtcgacgacctgcagtgggccgatccgagcagcctggccctgctcggctccgtgctc
gcccgcgtcccgacgctgcccgcggtgctcgcgttccggcccgccgagatcgacggcgac
gccctcgacgggatccggcatgcccgcggcctgcccgtgatgacgttgcgcccgctcggc
gcggcagcgctggaacggctggtcgacgacgccgcgctggtccgcgcgttgaccgacggg
accgacggcacgccgttcgccgtcgtcgaggtgctccgcgggctcgccgccgcgggcgac
gtcgtgcaggtgggcgggcgctggcggccgaccgcgccggacgccgcgggccgggcgggc
gagctggccagggccgggcagcggcgtggcatcgcccgccgcgcggcccggtaccgcgac
cgcgacgccgatctgctcgcgctcgtggcgatcgcaggtcgggaggtgcccgcggggacc
gtcgccgcggcgctgggtgccgacggccgcgacgtcctcgaccggttggccgccctggcc
gcggacggcctgctccgcctgggcgacatgggctgggccaccgcgcacgacctcgtcgcc
gagacggtcgtcgccggtctcgaccgcgccgaccgcggccggctgcacgggctgctcgcc
cgcgcgctggaggcggccgaggcggacccgtccgacgtcgcgcggcaccaccgggaggcg
ggcgacaccggcgccgccgccctcgcctatgcgcgcgccgccgcgtccgccctcgacgcg
cacgcgacccgcgaggcggccgcactcgccgacgcggggctgcgcctgcagccgcgcggt
gccgtcgcggccgagctgcacgagtaccgggcggccgcgagagcagcccacggcgacatc
gacggcgccgccggcgacctgcgcgccgcgctgacgggtgcgcccaccgaccggtcccgg
cgccgggcacggctggccatgctgtcgtcgggtgcgcgggacccgtgggcggcggccgac
ctcgcagagctggccctcgtcgaggccggtgacgatcccgcggcgagggcgttggccctg
gagacggccgcgatcctcgacatgaacctcggccgtgccgagcgggcggccgcccgttcc
gagcaggccctcgtcctctaccaggagctcggggacggacagggcgtcgcccgcatcctc
gacggccgggcgatggccacgttcctcgacggccggatcgccgagggggtggagctgttc
gggcgggtcgccgacctcttcgccggatcgggcgacctgctgcgcgtggtcaccccgcgc
tccacccgcggccacggtctggtgttcctgggccgtccggaggaggggctcgcggagacc
gacgccgcgctgcggctcgcgcgcgagctcgactcgccggagggcgtcgcctacgcctgc
tggcaccggtccgaggcgttgtcggcggcgggccgcaccgacgaggccgaggcgaccgcg
cgggaggcgctcgacgtcgcccgcgcgctcggccaccgtggctggacggccacggcccac
cgcgcgctcggcatcgccctgcagacccgcggcgacctcgacggcgcctgcgcccagttc
accgagtccggccgggtggccggcgactcgctgaccctcttcgcgtcgtgggccgccgcc
cggctcgcgcagatcgcggtggcgcagggccgcgaggcgtccgacctcgtcgcgagggcc
cggtcgatcggcccgccgctcggtcacctcgagatcccggagctgacgccgagccggtga
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