Pseudonocardia dioxanivorans: Psed_6104
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Entry
Psed_6104 CDS
T01479
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdx03400
]
Psed_6104
DNA repair and recombination proteins [BR:
pdx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Psed_6104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
ChlI
AAA_22
AAA_16
Lon_C
DUF7125
AAA
Zn_ribbon_LapB
nSTAND3
AAA_30
NTPase_1
AAA_5
NACHT
ABC_tran
AAA_14
MCM
DAP3
AAA_24
Rad51
MMR_HSR1
RsgA_GTPase
AAA_29
PP-binding
RecA
FeoB_N
Zeta_toxin
AAA_18
TsaE
Motif
Other DBs
NCBI-ProteinID:
AEA28207
UniProt:
F4CLS5
LinkDB
All DBs
Position
6459885..6461189
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AA seq
434 aa
AA seq
DB search
MGRCPACQAWGSLAQQSVPSGRGPRVAAGAPSAPARRIADVELDSARARPTGVDELDRVL
GGGLVPGAVVLLAGEPGVGKSTLLLEVAAKAAHRGRVLYVTGEESAGQVRLRAERTGGLH
DDLYLAAESDLGAIVGHLDALAPGLLIVDSIQTMSTSDVDGGVGGVTQVRAVTVGLTALA
KERGLPVVLVGHVTKDGSIAGPRVLEHLVDVVLAFEGDKQSTLRMVRGVKNRFGPADEVG
CFELRDEGIVGLADPSGLFLARFGATRDAVVPGTAVTVVMDGRRPMLAEVQALVAGANIP
SPRRAVSGLDSARVAMLLAVLERRVGVTLHDAEVYTATVGGMKVTEPAADLALALAVVSA
KRDLALPPDMVLLGEIGLAGEVRRVNGVGRRLAEAARLGFTQALVPPDSDVRSVGMKVQE
VADLGQVVRRLRRD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
gtggggcgttgccccgcctgccaggcgtggggctcccttgcgcagcagtcggtcccgtcc
gggcgcgggccccgcgtcgcggccggcgcgccgtcggcacccgcccgccggatcgccgac
gtcgagctcgactcggcacgcgcgcggccgaccggtgtcgacgagctcgaccgggtcctc
ggcggcggactcgtgcccggcgcggtcgtcctgctggccggtgagccgggcgtcgggaag
tcgacgctcctgctcgaggtcgcggcgaaggcggcgcaccgcggccgggtcctctacgtc
accggcgaggagtccgcggggcaggtccggctgcgcgccgaacgcaccggcggcctgcac
gacgatctctacctcgcggccgagtccgacctcggcgcgatcgtcggccacctcgacgcc
ctcgcgcccggcctgctgatcgtcgactcgatccagacgatgtccacatcggacgtcgac
ggcggcgtcggcggcgtgacgcaggtgcgcgcggtgaccgtcgggctcacggcgctggcc
aaggagcgcgggctgccggtcgtgctggtcgggcacgtcaccaaggacggttcgatcgcc
gggccacgggttctcgaacatctcgtcgacgtcgtgctggcgttcgagggcgacaagcag
tccacgctgcgcatggtccgcggcgtcaagaaccgcttcgggcccgccgacgaggtcggc
tgcttcgagctgcgcgacgagggcatcgtcgggctcgccgacccgtcgggactcttcctc
gcccgcttcggcgccacccgcgacgcggtggtccccgggacggcggtcaccgtcgtcatg
gacgggcgcaggccgatgctggccgaggtgcaggcgctcgtcgccggcgcgaacatcccg
agcccgcggcgggccgtcagcgggctcgacagcgcccgggtggccatgctgctcgccgtg
ctcgaacgccgggtcggggtgacgctgcacgacgcggaggtctacaccgcgaccgtcggc
gggatgaaggtgaccgaacccgccgccgacctcgcgctggcgctcgccgtcgtctccgcg
aagcgcgatctcgcgctgccccccgacatggtgctgctcggcgagatcgggctggcgggc
gaggtccggcgggtcaacggcgtcggccggcggctcgccgaggccgcccggctcggcttc
acgcaggcgctcgtgccgcccgacagcgacgtccggtccgtcgggatgaaggtgcaggag
gtcgcggacctcgggcaggtcgtccgcaggctgcggcgggactga
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