Pseudonocardia dioxanivorans: Psed_6116
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Entry
Psed_6116 CDS
T01479
Name
(GenBank) Lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Psed_6116
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdx01007
]
Psed_6116
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdx03016
]
Psed_6116
Enzymes [BR:
pdx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Psed_6116
Amino acid related enzymes [BR:
pdx01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Psed_6116
Transfer RNA biogenesis [BR:
pdx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Psed_6116
Prokaryotic type
Other AARSs
Psed_6116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_His
Talin_middle
Motif
Other DBs
NCBI-ProteinID:
AEA28218
UniProt:
F4CLT6
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All DBs
Position
complement(6471818..6473320)
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AA seq
500 aa
AA seq
DB search
MTDEHSTPADDDLPEQLRVRRAKRAELLEQGIDPYPVEVGRTHTLREVRDAHPDLEPDTA
TGDKVAVAGRVVFQRNTGKLCFATLREGDGTELQAMLSLADVGEESLAQWKAMVDLGDLV
LVEGEVITSRRGELSVSADTWRMLAKAVRPLPVAHRELSEETRVRQRYVDLIMRPRAREM
VRARSTVLRTLRRVFEERGYIEVETPMLQVLHGGATARPFVTRSNALSQDLYLRIAPELY
LKRAVVGGIERVFELNRVFRNEGIDSTHSPEFAMLEAYQAYATYDDMAELTRELILESAR
AVFGSTVVRRADGSEHDLGVPWRSVTLHASVAEAVGREVTIDTSAETLRKIAAEHDVELK
DSWSAGEIVLELFEKLVEHTLVEPTFVRDYPVEVRPLTRQHRDDPRLAEAWDLIVFGTEL
ATAYSELVDPVEQRERLYRQSLLAAAGDPEAMQLDEDFLRAMEYGMPPTGGMGMGVDRLL
MTLTGLGIRETILFPLVRSE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgagcactccacacccgccgacgacgaccttcccgagcagctccgggtccgc
cgggcgaagcgggcggagctgctcgagcaggggatcgacccgtacccggtcgaggtcggc
cgcacgcacacgttgcgtgaggtccgcgacgcgcatcccgatctcgagcccgacaccgcg
accggcgacaaggtggccgtcgcggggcgcgtcgtcttccagcgcaacaccggcaagctc
tgcttcgcgacgttgcgcgagggcgacggcaccgagctgcaggcgatgctcagcctggcc
gacgtcggggaggagtcgctggcgcagtggaaggcgatggtcgacctcggcgacctcgtg
ctcgtcgagggggaggtcatcacctcccgccgcggcgagctctcggtgtcggccgacacc
tggcggatgctcgccaaggccgtccgcccgctgcccgtcgcgcaccgcgagctctcggag
gagacgcgggtgcgccagcgctacgtcgacctcatcatgcggccacgggcccgcgagatg
gtgcgcgcccgctcgacggtgctgcggacgctgcggcgggtcttcgaggagcgcggctac
atcgaggtcgagacgccgatgctgcaggtgctgcacggcggcgcgacggcccgtccgttc
gtgacccgctcgaatgcgctgagccaggatctctacctgcggatcgcgccggagctctac
ttgaagcgggccgtcgtcggcgggatcgagcgcgtgttcgagctgaatcgtgttttccgt
aacgagggcatcgactcgacgcactcgcccgagttcgcgatgctggaggcctaccaggcc
tatgccacctacgacgacatggccgaactcacgcgtgagctgatcctggaaagcgccagg
gccgtcttcggttcgacggtcgtgcggcgcgccgacggttccgagcacgatctcggggtc
ccgtggcgcagcgtcacgcttcacgcatccgtggccgaggcggtcggtcgagaggtgacc
atcgacacctctgccgaaactctgcgtaagatcgccgcggaacacgacgtcgagttgaag
gattcctggtcggccggcgagatcgtcctggaactgttcgagaagctcgtcgagcacacg
ctcgtggaaccgacgttcgtgcgcgactacccggtcgaggtccggccactcacccggcag
caccgcgacgacccgaggctcgccgaggcctgggacctcatcgttttcggaacggagctg
gccaccgcctactccgaactcgtcgatcccgtggaacagcgggagcgcctctaccggcag
tcgctgctggcggcggcgggcgaccccgaggcgatgcagctggacgaggacttcctgcgg
gccatggagtacggcatgccgcccacggggggtatggggatgggcgtcgaccgtcttctg
atgacgctcaccggcctcggcattcgcgagacgattctgttcccgctcgtccgttccgag
tga
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