Pseudonocardia dioxanivorans: Psed_6214
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Entry
Psed_6214 CDS
T01479
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pdx
Pseudonocardia dioxanivorans
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdx03016
]
Psed_6214
Enzymes [BR:
pdx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Psed_6214
Transfer RNA biogenesis [BR:
pdx03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Psed_6214
Prokaryotic type
Psed_6214
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AEA28315
UniProt:
F4CNL7
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All DBs
Position
complement(6575203..6576126)
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AA seq
307 aa
AA seq
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MSARELVVLGTASQAPTRHRNHNGYLLRWDGEGLLFDPGEGTQRQLLFAGVPSSAITRIC
LTHFHGDHCLGVPGVVQRLSLDAVAHPVVAHYPASGAHWFARLRHATPFHEVADLQERPV
CGDGPIATGAFGTLTARRLDHPVESYGYRLDEPDGRRMLPDRLAAAGVVGPDVSRLVREG
TLAVGGRTVRVEDVSVPRRGQSFAFVMDTRLCAGVEELAAGVDMLVIESTFLHDDAALAH
DHGHLTAREAAGVAARAGVGTLVLTHFSQRYTDPTAFATEAAAVFDGPTVVAADLARVPL
PPRRGAV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcacgcgagctggtcgtcctgggcaccgcgagccaggccccgacgcggcaccgc
aaccacaacggctacctgttgcgctgggacggcgaagggctgctgttcgaccccggcgag
ggcacccagcggcagctgctgttcgccggcgtcccgagcagcgcgatcacccgcatctgc
ctgacgcacttccacggcgaccactgcctcggcgtccccggagtcgtgcagcggctctcc
ctcgacgcggtcgcgcaccccgtcgtcgcgcactacccggcctcgggcgcgcactggttc
gcccggctgcgccacgccacccccttccacgaggtcgccgacctgcaggagcggccggtg
tgcggcgacgggccgatcgccaccggcgcgttcgggacgctgacggcccgccggctcgac
catcccgtcgagtcctacggctaccgcctcgacgagcccgacggccggcgcatgctcccc
gaccggctcgccgcggccggtgtcgtcggccccgacgtgtcgcggctggtcagggagggg
acgctcgccgtcggcgggcgcacggtgcgggtcgaggacgtcagcgtcccgcggcgcggg
cagtcgttcgccttcgtcatggacacccggctgtgcgcgggcgtcgaggagctggccgcg
ggcgtcgacatgctggtgatcgagtcgaccttcctgcacgacgacgccgcgctcgcccac
gaccacgggcacctcaccgcgcgggaggcggccggggtcgccgcccgggcgggcgtcggc
actctcgtgctgacccacttctcgcagcgctacaccgatccgacggcgttcgcgaccgag
gcggccgcggtgttcgacggtccgacggtcgtcgcggcggacctggcgcgggtgccgctg
ccgccacggcgaggggcggtctga
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