Pseudonocardia dioxanivorans: Psed_6507
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Entry
Psed_6507 CDS
T01479
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx02020
Two-component system
pdx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Psed_6507
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psed_6507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdx03000
]
Psed_6507
Transcription factors [BR:
pdx03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
Psed_6507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
Crp
GntR
Sigma70_r4
Sigma70_r4_2
MarR_2
HTH_29
HTH_23
HTH_ParB
HTH_3
HTH_24
DUF977
HTH_IclR
wHTH-PRTase_assc
HTH_28
DUF7691
TrmB
Motif
Other DBs
NCBI-ProteinID:
AEA28596
UniProt:
F4CV50
LinkDB
All DBs
Position
complement(6889517..6890191)
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AA seq
224 aa
AA seq
DB search
MDEVLIRAGIFQGVEPHAAEVLAQALESAEFPRGHVIFSEGEPGDRLYIIGSGKVKIGRK
SPDGRENLLMVAGPSDMFGELSIFDPGPRTSSATAVTEVRAYTMDRGALREWIGKRPEIA
EQLLRVLARRLRRTNNMLADLIFTDVPGRVAKSLLQLARQFGSQESGLLRVTHDLTQEEI
AQLVGASRETVNKALADFAHRGWLRLEGKSVLILEPERLARRAR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaggttctgatccgcgccgggatcttccagggcgtggaaccacatgcggcggag
gtgctcgcgcaggcgctggagtccgccgagttcccgcgcgggcacgtcatcttctccgag
ggtgagcccggcgaccgtctctacatcatcggcagcggcaaggtgaagatcggccggaag
tcgccggacggtcgcgagaacctgctcatggtcgccgggccgtcggacatgttcggcgag
ctgtcgatcttcgacccggggccgcgcacgtcgtcggccacggcggtcaccgaggtccgc
gcgtacacgatggaccgcggcgcgctgcgcgagtggatcggcaagcgccccgagatcgcg
gagcagctgctgcgcgtgctcgcccgtcgcctgcgccgcaccaacaacatgctggccgac
ctgatcttcaccgacgtccccggtcgggtcgccaagtcgctgctgcagctcgcgcgccag
ttcgggtcgcaggagtcgggtctgctgcgggtcacccacgacctgacgcaggaggagatc
gcgcagctcgtcggcgcgtcgcgcgagaccgtcaacaaggcgctcgccgacttcgcgcac
cgcggctggctgcggctcgagggcaagagcgtgctgatcctggagcccgagcggctcgcg
cgccgcgcccgttag
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