Paenibacillus dendritiformis: QJQ58_02820
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Entry
QJQ58_02820 CDS
T09074
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdy
Paenibacillus dendritiformis
Pathway
pdy03420
Nucleotide excision repair
pdy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QJQ58_02820
03430 Mismatch repair
QJQ58_02820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdy03400
]
QJQ58_02820
Enzymes [BR:
pdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QJQ58_02820
DNA repair and recombination proteins [BR:
pdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QJQ58_02820
MMR (mismatch excision repair)
Other MMR factors
QJQ58_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
SLFN-g3_helicase
Viral_helicase1
PhoH
DEAD
AAA_30
AAA_16
nSTAND3
ResIII
NACHT
DUF3565
ANC1_spectrin
RecA
Motif
Other DBs
NCBI-ProteinID:
WGU95223
LinkDB
All DBs
Position
complement(628903..631077)
Genome browser
AA seq
724 aa
AA seq
DB search
MTDTFQSAYQEEQHHLDATLRDIRKQYEALQQIPVYKGDDFTEQVLEDTREQRRQRLQRA
AREPYFGRLDVREGSREQAIPLYIGKQGVDASERREQEASKSGADPYPLVIDWRAPVASL
FYSFTGGLEPAAYEAPEGTLTAEVHLKRNLVIRNEQLLRVVDTFDREQGEESVTDEFLVY
RLGENKDNKLRDIVSTIQSEQDAIIRAPKNKALFIQGVAGSGKTTVALHRLAYLLYQYQD
QIHAERMIIFAPNRMFLDYIGEVLPELGVGNIQQRTFADWALELTGLEERVQLASPMDEI
EQWYGSLAERPLDSSGSPGRFKGSLEWMRLLEEFVQQWVERAIPEEDFIPWDGGLLPHAT
IAHWFQQEYRSYEPAKRLERVAARMQRWLEMELKQELSKSRLQEKKRKGSAKLKSYLKRW
SKAEVMEVYKQLLQDDAYAGHLPPSVRKQTLASLKRGIVKQEDVATIVYLHLLLHGVASA
QRFDHVVIDEAQDFSPLQVALLDRIAKSHSFTILGDLSQGIHAYAGIEDWQEMREAFAGE
DTAYHALTRSYRSTMEIIHFANAILKRGVKTTMLAEPVFRSGNKVRIRHAAPEQAASWVA
SELQRHREQGYQTTAILTRTTEEAREWHERLRALGAEAHLIDGRQQQYSGGISVLPVYLS
KGLEFDAVILLHANDTHYGMSPLEARLMYVGCTRALHQLTLCVDGAISPLLPQSDDEWTI
HEHS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacacgtttcaaagtgcctatcaagaagagcagcaccatcttgatgcgacactc
cgggatatccggaagcagtatgaagcactgcagcaaattcccgtctataagggagatgat
tttaccgagcaagtattggaagacactcgcgagcagcgccggcagcgtctgcagcgggca
gcgagagagccttatttcggccgcctcgacgtccgggaaggaagccgcgaacaggcgatc
ccgctctacatcgggaagcagggggtcgacgccagcgagagacgggagcaggaagcctcc
aagtcaggcgcggatccctacccgctcgtcatcgattggcgcgctcccgtcgccagcctg
ttctactccttcacgggcggattggagcccgccgcctacgaggcgccggaggggacgctg
acggcggaggtccacttgaagcggaacctcgtgatccgcaacgagcagctgctgcgggtg
gtcgatacgttcgaccgggagcagggagaggagagcgtgaccgacgaattcctcgtctat
cgcttgggggagaacaaggacaacaagctgcgcgacattgtctcgaccatccaatcggag
caggacgcgattatccgcgcgccgaagaacaaggcgctgttcatccaaggggtcgccggc
agcggcaagacgaccgtcgccctgcatcggctcgcctacttgctctatcaatatcaagat
cagattcatgccgagcgcatgattatttttgcgccgaaccgcatgttcctcgactatatt
ggggaagtgctgcccgagctgggcgtcggcaatatccagcagcgcaccttcgccgattgg
gcgctggagctgaccgggctggaggagcgcgtgcagctcgcctcgccgatggacgagatc
gagcaatggtacggctccctcgcggagcggccgctcgacagcagcggcagcccgggacga
ttcaagggctcgctggaatggatgcggctgctggaggagttcgtccaacaatgggtggag
cgggcgataccggaagaagactttatcccatgggatggcggcttgcttccgcacgcgacg
atcgcgcactggttccagcaggagtaccgctcctatgagccggccaagcggctggagcgc
gtggccgcccgcatgcagcgctggttggagatggaactgaagcaggagctgagcaagtcc
cgcctgcaggagaagaagcgcaaaggctccgccaaattgaaatcatatctgaagcgctgg
tccaaagcggaggtcatggaagtctacaagcagctgctgcaggacgatgcgtatgccggg
caccttccgccatccgtaaggaagcagacattggcgagcttgaagcgcggcatcgtgaag
caggaagatgtagctacgatcgtctatctgcacctgctgcttcatggcgtggcttccgcc
cagcggttcgatcacgtcgtcatcgacgaagcgcaggacttctccccgcttcaagtcgcc
ctgctcgaccggatcgcgaagagccactcgttcacgatcttgggtgacctgtcccaaggc
attcatgcctatgccggcatcgaagactggcaggagatgcgcgaagccttcgccggcgaa
gacacggcatatcacgccttgacgcgaagctaccgttcgacgatggagattatccacttc
gccaacgcgatcctgaagcgcggcgtgaagacgaccatgctcgccgagccggtattccgc
agcgggaacaaggtccgcatacggcatgcggcccctgagcaggccgcttcctgggtcgcc
agcgaactgcagcgccaccgggagcagggctaccagacgacggcgattctgacccgcacg
acagaggaagcgcgggaatggcatgagcggctgcgggctctgggcgccgaagcgcatctg
atcgacggcaggcagcagcaatattcgggcggcatctcggtccttccggtctatctgtcg
aaagggcttgagttcgacgccgtcattctgctccacgccaatgacacgcattacggcatg
agcccgctggaagcgcggctgatgtatgtcggctgcacgcgcgcgcttcatcagctgacc
ctgtgcgtagacggcgccatcagcccgctgctcccgcagtcggatgatgaatggaccata
cacgagcattcgtaa
DBGET
integrated database retrieval system
