Paenibacillus dendritiformis: QJQ58_03895
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Entry
QJQ58_03895 CDS
T09074
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdy
Paenibacillus dendritiformis
Pathway
pdy00300
Lysine biosynthesis
pdy00470
D-Amino acid metabolism
pdy01100
Metabolic pathways
pdy01110
Biosynthesis of secondary metabolites
pdy01120
Microbial metabolism in diverse environments
pdy01230
Biosynthesis of amino acids
Module
pdy_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QJQ58_03895 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QJQ58_03895 (lysA)
Enzymes [BR:
pdy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
QJQ58_03895 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WGU95422
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All DBs
Position
874364..875704
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AA seq
446 aa
AA seq
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MHLHGTSTINESGHLEIGGCDVTTLKNQFGTPLYIMDEALIRTRSREYMDAFRESGLNFQ
VAYASKAFCVKAMCRIADEEGLSLDVVSEGELHTALQAGFPAERIHFHGNNKTPDEIEMA
LDAGIGCFVVDSFAELHLLNALAKMRRQQVSVLLRVTPGVEAHTHEYISTGQTDSKFGFD
IGNGTAFQAVAQASDAEGVHLLGIHSHIGSQIFETEGFQMAVQRVAEFAANVRSQMDVVF
RVVNLGGGFGIRYVEGDTPLAVRDYVKAITEAVRTHFGPIYSELPEIWIEPGRSIVGEAG
TTLYTIGSIKDIPGVRKYVAVDGGMTDNPRPALYESKYEAMVANRAKDAADEIVSIAGKC
CESGDMLIWDVALPSVSAGDLLAVSCTGAYNYSMASNYNRIRRPAVVFVREGEADLVVRR
ETHEDIVRCDLIPARLEKRESQPLGR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcacttacatggaacaagtacaatcaatgaatccggccacctcgaaatcggcggctgt
gatgtgaccaccttgaaaaaccagttcggaacaccattgtacattatggacgaggcgctc
attcgtacccgctcccgcgaatatatggatgccttccgcgagtcggggctgaacttccag
gttgcctacgcgagcaaggcgttctgcgtgaaggccatgtgccgtatcgcggacgaagag
ggcttgtcccttgatgtcgtatctgaaggggaactgcatacggcgctgcaggcaggcttt
cctgccgaacggatccactttcacggcaacaacaagacgccggacgagatcgagatggca
ctcgatgccggcatcggatgcttcgtcgttgacagcttcgcagagctgcacctgctgaat
gcgctcgccaaaatgcggcgtcagcaagtatcggtgctgctgcgcgttacacccggcgtc
gaagcgcatacccatgaatatatctcgaccgggcagacggattccaagttcggcttcgat
atcgggaacggaacggcgtttcaggccgtcgcgcaagcatccgatgcggaaggcgtgcat
ctgctcgggattcactcccatatcggatcgcaaatttttgagacggaaggattccagatg
gctgtacagcgcgttgcggagttcgcagccaacgtgcggagccagatggatgtcgtcttc
cgggtcgtgaatctgggcggcggctttggcattcgttatgttgagggcgatacgccgctg
gctgtccgggattacgtgaaggcgattacggaggcggtgcgcactcacttcgggccaatc
tacagcgaattgccggagatctggatcgagccgggccgcagcatcgtcggggaagccggc
acgacgctgtacaccatcggttcgattaaggatatccctggggttcgcaagtatgttgcc
gtggatgggggcatgactgacaatccgcgtccggcgctgtacgaatcgaaatatgaggcg
atggttgccaatcgtgcgaaggatgcggccgatgaaatcgtatcgattgcgggcaaatgc
tgcgagagcggcgatatgctcatctgggatgtggcgctgccatccgtatcggctggagat
ctgctggccgtctcttgcacgggagcgtataactattcgatggcgagcaattacaaccgg
attcggcgcccggctgtcgtctttgtccgggagggcgaagcggatcttgtcgtccgccgc
gaaacgcatgaagatattgtccgctgcgatctgattccggcacggctggaaaaacgcgaa
tcgcagccacttggccgctaa
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