Paenibacillus dendritiformis: QJQ58_11095
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Entry
QJQ58_11095 CDS
T09074
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pdy
Paenibacillus dendritiformis
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdy03009
]
QJQ58_11095 (rimO)
Enzymes [BR:
pdy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QJQ58_11095 (rimO)
Ribosome biogenesis [BR:
pdy03009
]
Prokaryotic type
ribosomal protein modification factors
QJQ58_11095 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
PDEase_I_N
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WGU96744
LinkDB
All DBs
Position
complement(2397700..2399028)
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AA seq
442 aa
AA seq
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MTEQIKIVTLGCDKNLVDSEIMSGIMDQYGHELVENAEDATVIIVNTCGFIDAAKEESVN
TILELADLKETARLKALIVSGCLTQRYKEQLLEEMPEIDGIVGTGDFHKINDIVAEALQG
RKPVRVGNPVFNYEQILPRKVATPRYTAYVKIAEGCDNNCTFCSIPIMRGKFRSRSMESI
LAEVKQLADQGVKEISLIAQDSTNYGVDLYDGFKLPELMNKVSEVPGVEWVRLHYAYPGF
FTEELIDTIASNPKVCKYVDMPLQHSEDTILKRMRRPGRQRDSRELVRKIRARIPEVALR
TSIIVGFPGETDQDFENLASFVREMKFDRLGVFTYSPEEDTAATRLPDHVPDEVKEWRAN
TLMEIQREVSKNVNERHIGRMLDVLVERYDGRNDVYIGRSQYDAPEIDGEVFISNCKLSI
GEIAKVKITHALEFDLAGEGVL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaaatcaaaatcgtaacgctgggctgcgacaaaaacttggtggattcggag
attatgtccggaataatggatcagtacgggcatgaactggtagaaaacgcggaggatgca
accgtcattattgtgaatacgtgcgggttcatcgatgcagcgaaggaagaatcggtcaat
acgattttggaattggcagacttgaaggagaccgcccgcttgaaggcgctcatcgtttcc
ggatgtctgacgcagcgatacaaggagcaattgttggaggaaatgccggagatcgacggc
atcgtcggcacgggggacttccacaagatcaacgatatcgtcgcggaagcgctccaaggc
aggaagccggtccgcgtcggcaatccggtcttcaactatgaacagatcttgccgcgcaag
gtcgcgacgccgcgctacaccgcttatgtcaaaatcgcggagggttgcgataacaattgc
accttctgcagcattccgattatgcggggcaaattccgcagccgctcgatggaatcgatt
ctggccgaggtgaagcagcttgcggatcaaggcgtcaaggagatcagcctgatcgcccag
gactccaccaactacggcgtcgatctgtatgacggcttcaagctgccggaattaatgaac
aaagtaagtgaagtacctggcgtcgaatgggttcgccttcattatgcgtatccggggttt
ttcacggaagaactgatcgatacgatcgcttcgaatccgaaggtctgcaaatatgtcgat
atgccgctgcagcatagcgaagacacgattctcaagcggatgcgccggccgggccgccag
cgcgattcccgcgagctggttcgcaaaatccgggctcggattccggaagtcgcgctccgc
acctcgattatcgttggttttccgggcgagacggaccaagatttcgaaaatttggcttcc
ttcgtgcgtgaaatgaagttcgatcgtctcggcgtcttcacttattcgccggaggaagat
acggcggcgacgcggcttccggatcacgtgccggatgaagtgaaggaatggcgcgcgaat
acgctgatggagattcagcgcgaagtgtcgaagaacgtgaacgagcgccatatcggccgc
atgctggacgtgctggttgaacgctatgatggacgcaacgacgtatatatcggacgttcg
cagtacgatgcgccggagattgacggtgaagtgttcatctcgaactgcaaattaagcatc
ggggagatcgccaaggtcaaaattacgcacgcactcgaatttgatttggccggggagggt
gtcttgtga
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