Paenibacillus dendritiformis: QJQ58_11220
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Entry
QJQ58_11220 CDS
T09074
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdy
Paenibacillus dendritiformis
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdy03016
]
QJQ58_11220 (truB)
Enzymes [BR:
pdy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QJQ58_11220 (truB)
Transfer RNA biogenesis [BR:
pdy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QJQ58_11220 (truB)
Prokaryotic type
QJQ58_11220 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WGU96769
LinkDB
All DBs
Position
complement(2425439..2426353)
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AA seq
304 aa
AA seq
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MTELHGVLPVWKPAGWTSHDVVAKVRRLIREKRIGHTGTLDPQVVGVLPLCVGRATRLVE
YLQEMPKEYEATLRLGMSTDTEDMSGEVVERADASHVTEAMVKEALLSFIGPIEQVPPMY
SAVKVNGKRLYELAREGKTVERKPRQVTIHHIELIGMTLGGAEPEVRFRVQCSKGTYIRT
LCVDVGRKLGVPATMAELIRTRSANFGEEDSFTFAQIEEAMAAGTLGELLIPMDRAVSHF
PELRVAPAFAPHAVQGKGIPERGLNVPPLTNCIYRLYDEEGTFFGLYHKPDTEQVLRPIK
VFVP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcttcatggtgttcttccggtatggaagccggcaggctggacgtcgcacgat
gtcgtggccaaagtccgccggctcattcgggaaaagcggatcgggcatacggggacgctt
gaccctcaagtcgtgggggttctgccgttatgcgtcggcagagcgacccgactggttgaa
tatttgcaggaaatgccgaaggagtatgaagcgacgctgcggcttggcatgtcgaccgac
acggaggatatgtcaggcgaagtggtggaacgcgccgatgcatcccatgtgaccgaagcg
atggtcaaggaagcgctgctgtcgttcatcgggcccatcgaacaggttcctcccatgtac
tccgccgtcaaggtgaacgggaagcggctgtacgagctggcgcgcgaaggcaagaccgtg
gagcgcaagcctcgtcaagtgacgatccatcatatcgagctgatcggaatgacgcttggc
ggcgcggaaccggaggtgcggttccgtgttcaatgctccaagggaacgtacatacgcacc
ctgtgcgtcgatgtcggacggaagctgggggtgccggcgacaatggcggaattgatccgg
acccgctccgctaacttcggggaagaggacagcttcaccttcgcccagattgaagaagcg
atggcggccggaacgctgggagagctgctgattccgatggatcgcgccgtctcgcatttt
cccgagctgcgggtcgctcccgccttcgcgccgcatgcggttcagggcaagggcataccg
gaacgagggctgaacgttccgcctttgacgaattgcatctatcggttgtatgatgaagaa
ggaacttttttcggcttgtatcataagccggacacggagcaggtgctgcgtccgatcaag
gttttcgtgccttaa
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