Paenibacillus dendritiformis: QJQ58_12195
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Entry
QJQ58_12195 CDS
T09074
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pdy
Paenibacillus dendritiformis
Pathway
pdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QJQ58_12195 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdy03400
]
QJQ58_12195 (priA)
Enzymes [BR:
pdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QJQ58_12195 (priA)
DNA repair and recombination proteins [BR:
pdy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QJQ58_12195 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
PIF1
T2SSE
AAA_19
SLFN-g3_helicase
zinc-ribbons_6
AAA_16
ATPase_2
AAA_30
Flavi_DEAD
DAP3
RUBY_RBDX
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
WGU97668
LinkDB
All DBs
Position
complement(2667081..2669669)
Genome browser
AA seq
862 aa
AA seq
DB search
MRDEWQAGAVGINPGLPIARVIVDVSVKDTDRPFDYAIPPSMAEWIETGSRVGVPFGGRT
VQGFVIGLSDRTDVPLSRLKPIQQLLDVVPPLPADLVELGMWMSDRYVCTLTAALQAMIP
GAIKGKREKALSLGDDARLFLQGADGGRDELALRPDRLLDDPQTRSLLAYVQRNEPLPAP
KLLQSFPQAARLIKEALQHGWLQETERIKDRIGVKRLKRVTLTVDDVGEAVARLGSRAGR
QQETLRLLAEYGGELPLKSLNASAVKALESKGYVAIDEVEVMRDPYAQRHFRPSKPLPLT
EEQQRVFEAIAHAVDEQEYQTFLLHGVTGSGKTEVYLQAIERCLDSGREAIVLVPEISLT
PQMVERFKGRFGSRVAVMHSRLSQGERYDEWRKIREGRVQVAIGARSAVFAPFPRIGLII
MDEEHESSYKQEETPKYHARDVAIERARRQGAVVVLGSATPSMETYYASRLNGYEQLPAG
LEAPPWKLTPLAMPSRVGGRPLPPVTVVDMREQLKLGNRSMFSAPLEAALEQRLERQEQT
VLLLNRRGYSTFVMCRSCGYVAQCPECDISLTYHMKTGHMRCHYCGHAERAPEVCPSCES
EHIRYFGTGTQRVEEQLARRFPGIRVIRMDVDTTSEKGSHERLLQQFRERKADVLLGTQM
VAKGLDFPYVTLVGVIAADSALHMPDFRAAEKTFHLLTQVAGRAGRHDLPGEVIVQTYAP
EHYSIIHASGHDYRGFASEELRHRRNLMVPPFCRLALLSMSHEQLPLLVRVAENAAQRLK
ELAERQGWLLPLHEHAEAMEILGPVASPIPRIKNRYRFQCIIKCRGDVNLSGLLAEAMRE
FDSIAKEQDVRFSVDIDPQMMM
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacgaatggcaagcgggggcagtcggaattaatcccggcttgccgatcgcacgt
gtcatcgtcgatgtgtcggtcaaagatacggaccggccgttcgactacgccattcctcca
tccatggcggaatggatcgagacgggcagccgggtcggcgtcccgttcggcgggcggaca
gtgcaaggcttcgtcatcggattatccgaccggacggatgtgccgctgtcccggctgaag
ccgattcagcagctgctggatgtcgtcccgccgctcccggccgatctcgtcgagctcgga
atgtggatgagcgaccgctatgtatgcacgctgacagccgctctgcaagcgatgattccg
ggagccatcaagggcaagcgggagaaggcgctctcgctgggcgacgatgcccgtctgttc
cttcaaggcgccgacggcgggagggatgaattggcgctccgcccggatcgtctgctggac
gacccgcagacacgcagcctgcttgcttatgtgcagcgcaacgagccgctgccggctccg
aagctgctgcagagctttccccaggcagcgcgcctcattaaggaagcgctccagcatggc
tggctccaggagacggagcggattaaggatcgcatcggagtcaagcggctgaagcgggtg
acgctgacggtcgatgatgtcggcgaggcggttgcccggctgggcagccgggctggaaga
cagcaggaaacgctgcggctccttgcggaatatggcggagaactgccgctcaaaagcttg
aacgcatccgcggtcaaggcacttgagtcaaaaggctatgtcgccatcgacgaggtcgag
gtgatgcgggatccatatgctcaacgccacttccggccatcgaagccactgccgctgaca
gaggagcagcagcgcgtcttcgaagcgattgcgcacgcggtggacgaacaggagtatcag
acctttctgctgcatggggtcaccgggagcggcaagacggaggtctacttgcaggcgatc
gagcgctgcctcgattccggacgcgaagcgatcgtgctcgtgccggagatatcgctgact
ccgcagatggtcgagcgcttcaagggaagattcggctcccgggtggcggtgatgcatagc
cgtctctcccagggcgaacgttacgacgagtggcgcaaaatccgcgaaggccgcgtgcag
gtggcgatcggtgcccgctcagcggtgtttgccccttttccccggatcggccttattatt
atggatgaagagcatgagtcatcctacaagcaggaagagacgccgaaatatcacgcccgc
gatgtggcgattgaacgggcgcgccggcaaggcgccgtcgtcgttctcggttcggcgacg
ccttcgatggagacgtattacgcctcccgtctgaacggctatgaacagctgcctgcgggg
ctggaggcgccgccttggaagctgaccccgctggcgatgccttcacgcgttggcggcagg
ccgcttcctccggtgacggtcgtcgatatgagggagcagctgaagcttggcaaccgttcc
atgttcagcgcgccgctggaggcggcactggagcagcggctggagcgtcaggagcagacc
gtcctgctgttgaatcgcagaggctactcgacgttcgtcatgtgccgcagctgcggctat
gtggcccagtgtccagaatgcgatatttccctgacgtaccatatgaagacggggcatatg
cgctgccactactgcggtcacgcggagcgggccccggaagtatgcccgtcatgcgagagc
gagcatatccgttatttcggcacgggcacccagcgggtagaggaacagctcgcccgccgc
ttccccggcattcgcgtcatccggatggacgtggacacgacctcggagaaaggctcgcat
gaacggctgctgcagcagttccgcgaacggaaggccgacgtactgctgggcacgcaaatg
gtggcgaagggactggatttcccgtatgtcacgctggtcggcgtcattgccgccgattcg
gcgctgcatatgccggacttccgcgcggcggagaagacgttccacctgctgacgcaggtt
gccggccgggccggacgccatgatctgccgggcgaagtcatcgtgcagacctatgcgccg
gagcattactcgatcatccatgcgtcggggcatgattaccgcggcttcgcttccgaagaa
ctgcggcaccgacgcaatctgatggtgccgcccttctgccgcctggcgttgctgtccatg
tcgcacgagcagctgccgctgctcgtgcgcgtggccgagaacgcggcccagcggctcaag
gagctggcggagcgccaaggctggctgcttccgctgcatgagcatgcggaggcgatggaa
attctcggaccggtcgcctctccgattccgcgcatcaagaatcgctaccgtttccagtgc
attatcaaatgccggggagacgtgaatctgtcgggtctgctggcggaagcgatgcgggag
ttcgattcgatcgccaaagagcaggacgtccggttcagcgtcgatatcgacccgcagatg
atgatgtaa
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