Paenibacillus dendritiformis: QJQ58_12705
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Entry
QJQ58_12705 CDS
T09074
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pdy
Paenibacillus dendritiformis
Pathway
pdy00470
D-Amino acid metabolism
pdy00550
Peptidoglycan biosynthesis
pdy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QJQ58_12705 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QJQ58_12705 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdy01011
]
QJQ58_12705 (murD)
Enzymes [BR:
pdy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
QJQ58_12705 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdy01011
]
Precursor biosynthesis
Amino acid ligase
QJQ58_12705 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Pyr_redox_3
2-Hacid_dh_C
FMO-like
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
WGU97043
LinkDB
All DBs
Position
complement(2777323..2778750)
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AA seq
475 aa
AA seq
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MEHPDTYQGKRVVVLGLAKSGVSVAKTFHERGALVTVNDKKERHKCPEASELEALGICVV
CGHHPDDLLNASVQLVVKNPGIPYSAPPVRQALALGIEVVTEVEVAYHLSPAPIIGITGS
NGKTTTTTWVGNMLEAAGLRPIVAGNIGTPLCQAAGEAGADNVLVAELSSFQLKGTSEFR
PRVASLLNLSETHLDYHGTMEDYVQSKARLFRNMANGDIAVLNAGDATCRALAPDIGARI
WWVSSTRRVECGVYVEPPYPEASGEGEDEDRQLVYADEAGELHPIIEVQEIGLPGRYNVD
NALAAVAISIAAGAEPAALAEPLRSFRGVEHRLEYVGKVNGTSYYNNSKATNTKATLMAL
EAFEAPVVLIAGGLDRGLDFLELVPVLKERATAVVTMGETREILAAIAAKAGLTKVAVVD
NVDNASDAVSEAVRLAAGYAKPGDVVLLSPACASWDMFPSYEERGRMFKAAVHSL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaacatccagatacgtaccaaggaaagcgcgtcgtcgttctcggcctggccaagagc
ggcgtcagtgtggctaagacgtttcatgaacgcggtgccctcgtaaccgtcaatgataag
aaagaacgccataaatgccctgaagcttcggagctggaagctttgggcatttgtgttgta
tgcggccatcacccggacgatctgttgaacgccagcgtccaactggtcgtcaaaaatccg
ggcattccgtactcggcgccgcctgtgcgccaggcgctcgcgctcggcatcgaggtcgtg
actgaggtggaggtcgcttatcatctcagtccggcgccgatcatcggcattacgggcagc
aacggcaagacgacgacgacgacctgggtcggcaatatgctcgaagcggccgggcttcgt
ccgatcgtcgccggcaatatcggcacgccgctctgccaggctgccggggaagcgggcgcg
gacaacgtgctggtcgcggagctgagcagcttccagctcaaggggacatccgaattccgt
ccgcgtgtcgccagcttgctgaacttgtcggagacccatttggattaccatgggacgatg
gaggattatgtccagtccaaggcccgcttgttccgcaatatggcgaacggggatatcgcc
gtgctcaatgcgggcgacgcgacctgccgggcactcgctccggatattggcgcccggatc
tggtgggtgtcgtccacgcggcgcgtcgaatgcggcgtatacgtagagcctccttacccg
gaagcgtccggcgaaggggaggacgaagaccgccaattggtgtatgcggatgaagcgggg
gaattgcatccgatcatcgaagtgcaggagattgggttgcccgggcgttacaatgtggac
aatgccttggcggccgttgccatatcgattgcggcgggcgccgagcctgcggcgctggcg
gagccgctccgatcgttccggggcgtggagcaccgcctcgaatacgtgggcaaggtgaac
ggcacatcgtactataacaattccaaggcgacgaatacgaaggcgacgctgatggcgctg
gaggcgttcgaagcgccggtcgtcctgattgccggcggcctggaccgcgggcttgatttc
ctggagctggttccggttctgaaggagcgggccacggccgtcgtcacgatgggcgaaacg
agggagattctggcggccatcgccgcgaaggcgggtttaacgaaggtggcggtcgtcgac
aatgtagataatgcatcggatgccgtctcggaagcggtgcgcctggcggccggctatgcc
aagccgggcgatgtcgtgctgctgtcgccggcttgcgcgagctgggatatgttcccttcc
tatgaagagcgcggacgaatgtttaaggcggcggtgcatagtctttaa
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