Paenibacillus dendritiformis: QJQ58_13020
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Entry
QJQ58_13020 CDS
T09074
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pdy
Paenibacillus dendritiformis
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdy03400
]
QJQ58_13020 (addB)
Enzymes [BR:
pdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QJQ58_13020 (addB)
DNA repair and recombination proteins [BR:
pdy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QJQ58_13020 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WGU97102
LinkDB
All DBs
Position
complement(2850415..2853948)
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AA seq
1177 aa
AA seq
DB search
MALHFVIGRSGSGKSAHLLNEIRQRLETQPEGPPMILLVPEQGTFQAEHALVTSERLSGM
LRTQVLSFRRLAYRVMQETGGTALTPIGEEGKKMLLYKILQRRKSDLPLFAGAAEQFGFI
EKLNDLFDEMKRYRIQASEVDEHAAFVQEHVDGQPLLSAKLHDLSAVLHEFETELEQHYL
DGEDVLVRLAEGIPHSDYVRQAEIWIDGFNGFTPQEYAVLASLLLHARHVTVALCLDRPY
ALGEEPHELNLFHPTATTFLKLSSIADTLGVDMGEVIQLGGQDTLPRFASSPRIAHLERH
FDRRSAYRPASPAGERAEISVHAAVNRRAEVEGAARDILRRAQTEGVRWREMAVMVRNLP
DYAELIDTVFGDAGIPYFTDQKQAVLHHPFVEMTRAALDILIGYWRYDAVFRYVKTDFVL
PEDGSVTRESFDRLENYVLACGIEGSKWTNGRPWPAEPRQSLDPDDPVAAETAEAVPEHA
PEWAEQCRRRIVEPLSALQRSLARSRHVQDMCEALYTFWIRLGVPDKLERMSQEALLDGD
VQRSREHRQIWGEMLDILDQMVEMLGGEKMPLELFAGMLETGFESVKLALVPPALDQVLI
ASMDRTRSSQIKHLYVLGVNDGVMPARPIEDGLLTEYERDLLLTIGMELAPGIRRKLLDE
RFVIYHAFTSPSESLWLSYALADEEGRSLLPSETVRQIRGLFPGMQEALLLAEPNEFLPE
AEQADFIAYPEAALRQLIAQLREWRQGRPIADLWWDVYRWFAGQPAWRDRLKTVLGSLAY
RNQAQALTADTSRQLYGQLLRTSVSRMERFVACPFSHFASHGLKLKERRLYRLEAPDIGQ
LFHAALSRFAGELQAQHRSWAELTPQECEAEADRIVDLLAPRLQGEILLSSERYGHISGK
LKRIVGRAAAVMGEHAKRGQFEPVALEMDFGPDKPLPPLRFTLDNGCTMEIIGRIDRVDK
ADSERGVLLRVIDYKSSQTDLALHEVYYGLSLQMLTYLDVLLTYAEEWLGTEALAAGTLY
FHVHNPLLQAANGLNEEQAYEQLLKRFKMKGLVLADRETVRLMDGSVEQGHSQVLPLAVK
ADGSFYSNSSVATEEQWDLLRGTVRSVIRDIGTRITNGDVVIDPYRSGTATACDFCSYKP
VCQFDELVDGNQYHLMPRLGKDEVWAKLKGGEANDGQ
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttggctttgcatttcgtaatcggacgctcggggagcggcaagtcggcgcatctgctgaat
gagatccggcagaggctggagactcagcccgaaggtccgccgatgattctgctcgtgcct
gagcagggaacgttccaggcggagcatgcgctcgtcacctcggagcgcctgtcggggatg
ctgcggacgcaagtcctgagcttccggcgcttggcgtaccgcgtcatgcaggagactggc
ggcacggcgctcacgccgattggagaggaaggcaagaagatgctgctgtacaaaattttg
cagcggcgcaagtccgacctgcctctcttcgccggagcggcggagcaattcggcttcatc
gaaaaactgaatgatctgttcgacgagatgaagcggtaccggatccaggcttccgaggtg
gatgagcatgccgcgtttgtccaggagcatgtggacggccagccgctcctgtcagccaag
ctgcacgatttgtccgccgtgctgcacgagttcgagactgagctggagcagcattatttg
gacggcgaggatgtgcttgtccggctggcggaaggcattccgcactcggactatgtccgg
caggcggagatatggattgacggcttcaacggcttcacgcctcaggaatatgcagtgctg
gcatcgctgctgctgcatgcccgccacgtcaccgtagcgctctgcctggatcggccttac
gccttgggggaggagcctcatgagctgaacctgttccatcctacggcgacgacctttctc
aagctgagcagcatcgccgatacgctcggcgtcgatatgggagaagtcatacagctgggc
ggacaggacacgctgccaagattcgcttcctcgccgaggatcgcccatctggagcgtcat
ttcgaccggcgttcggcttatcgtcccgcctcccccgccggcgagcgggcggagatttcc
gtccatgccgcggtcaaccgccgcgcggaagtggaaggggcggcgcgcgacattttgcgc
cgggcgcagacggagggcgttcgctggcgggagatggccgtcatggtcaggaacttgccg
gattacgcggaattgatcgatacggtcttcggcgatgcgggcattccttatttcacggat
cagaagcaggcggtgctccatcatccgttcgtcgagatgacgcgcgccgcgctggacatc
ctgatcggttactggcgctatgatgcggtattccgctatgtgaagacggacttcgtcctg
ccggaagacgggagcgtgacgagggaatccttcgatcggctggagaactatgtgctggcc
tgcggcatcgagggctcgaaatggacgaacggacgaccgtggcctgccgaaccgcggcag
tcgctggatcctgacgatccggtcgccgccgagacggccgaggccgttccggagcatgcc
ccggaatgggcggagcagtgccgtcgccggattgtcgagccgctctctgcgctgcagcgc
tcgctcgcgcgaagccggcatgtgcaggacatgtgcgaggctctatacacgttctggatc
cgtcttggggtgccggacaagctggagcggatgagtcaggaggcgctgctggacggcgat
gtgcagcgttcccgggagcatcgccagatctggggcgagatgctggatatattggaccag
atggtggagatgctgggcggagagaaaatgccgctcgagctgttcgccgggatgctggag
accggcttcgagagcgtgaagctggcgctcgtgcctcccgcgcttgatcaggtgctgatc
gcgtccatggatcggactcgatcaagccagatcaagcatctgtacgtgctcggggtcaac
gacggggttatgcctgcgcgcccgatagaggatgggctgttgaccgagtatgagcgggat
ctgctgctcacgatcgggatggagctggcgcccggcatccggcgcaagctgctggacgag
cgcttcgtcatctatcatgccttcacttctccgagcgagagcttgtggctcagctacgcg
ctggccgacgaggaaggccgctcgctgctgccttcggagacggtgcggcagatccggggc
ctgttcccgggcatgcaggaagcgctcctgttggcggagccgaatgagtttctgccggaa
gcggagcaggccgatttcatcgcctatccggaagcggcgcttagacaattgattgcccag
ctgagggaatggcggcagggccgcccaatcgcggatctgtggtgggacgtgtaccggtgg
ttcgcagggcagccggcttggcgggatcggctgaagacggtgctcggatcgctcgcctac
cgcaaccaggcgcaagcgctgacggccgacacgagccggcagctgtacgggcagctgctg
cggacgagcgtctcccgcatggagcggttcgttgcctgcccgttctcgcatttcgcctca
catggcttgaagctgaaggaacgaaggctgtatcggttggaggcgccggatatcggccag
ctgttccatgcggcgctaagccgctttgccggcgagctgcaggcccagcaccgctcctgg
gcggagctgacgccccaggaatgcgaggcggaagcggatcgcatcgtcgatctgctggcc
ccccggcttcagggggagattctgctcagctccgagcggtacggccatatatcgggcaag
ctgaagcggattgtcggccgggccgcggccgtgatgggcgagcatgccaagcggggccaa
ttcgagccggtggcgctggagatggatttcggccccgacaagccgctgccgccgcttcgc
ttcacgctggacaacggctgcacgatggagatcatcggccgcatcgaccgcgtcgacaaa
gcggacagcgagcggggcgtcctgctgcgggtgatcgattacaagtcgagccagacggat
ctggctctccatgaagtgtactatgggctgtcgctgcagatgctcacctatttggacgtg
ctccttacgtatgcggaggaatggctcggcacggaggcgctagccgccggaacgctttat
ttccatgtgcataatccgctccttcaggcggccaacggcttgaatgaggagcaggcttac
gagcagctgctcaagcgattcaaaatgaaggggctcgtcctggccgaccgcgagaccgtc
cgcctgatggacggatcggtcgagcaagggcattcccaggtgcttccgctcgcggtgaag
gcggacggatcattctacagcaattcctctgtcgctacggaggagcagtgggatctgctt
cgggggaccgtccgctcggtcatccgggatatcggcacgcgcatcacgaacggcgatgtg
gtgatcgatccgtaccggagcggcacggcgacggcatgcgatttctgttcctataagccg
gtctgccaattcgacgaattggtcgacggcaatcaatatcatctaatgccgcggctgggc
aaagacgaagtatgggcgaagctgaagggaggcgaagcgaacgatggacaataa
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integrated database retrieval system
