Paenibacillus dendritiformis: QJQ58_16580
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Entry
QJQ58_16580 CDS
T09074
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
pdy
Paenibacillus dendritiformis
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdy03021
]
QJQ58_16580
Transcription machinery [BR:
pdy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QJQ58_16580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_3
HTH_Tnp_ISL3
GerE
HTH_50
HTH_38
HTH_1
HTH_31
HTH_24
HTH_37
MarR_2
RE_TdeIII
DUF1492
KORA
HTH_28
Cyclophil_like2
TnsD
DUF134
SHOCT-like_DUF2089-C
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
WGU92205
LinkDB
All DBs
Position
complement(3630700..3631470)
Genome browser
AA seq
256 aa
AA seq
DB search
MSAASRHGTAEDAIQLISAYQKTQDNDIATLLIHKYEPMVKMAAGKISRNRPDLYEDLMQ
VGNMALIRLLQQFDSSLGVPFEAYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALIQQT
IDELTVQLERSPNVEEIAERLELSVEETVEVLAGRECYHYVSLDTPLSQEESAATLGELI
SSDSDDYEAVERRMDLSDAMAALKAEERQVLALVFEEGLSQRAAAERLGVSQMSVSRIQR
RATDKLRHILSSRYDA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagcctcccggcatggaacagccgaagatgcgattcagctcatcagtgcttat
cagaagacgcaggacaacgatatcgccacgctcctcatccacaagtatgagcccatggtc
aagatggccgctggcaaaatttcgcgcaaccgtcccgatttgtacgaagacctgatgcag
gtcggcaatatggcattgattcgtctgctgcagcaattcgacagctccttgggcgtgccc
ttcgaagcttatgcgatgaagagcatgatcggtcatatgaaaaatttccttcgggacaag
tcgtggtatattcaagtgccgcgccgaatcaaggagaagggagccctcattcagcagacg
atcgacgaattgaccgttcagctggaacgttcgccgaacgtggaggagattgcggagcgg
ctcgaattatccgttgaggagactgtcgaagtattggccggccgggaatgctatcattat
gtatcgctggacacgccattgtcgcaggaagagagcgcggcgacgctgggggagctgatc
agctcggacagcgacgattacgaagccgtcgagcgccggatggatctgagcgatgcgatg
gcagcgctcaaagcggaagagcggcaggtgcttgccctcgtattcgaggaagggctgtcc
cagcgcgcggccgccgaacggctcggggtatcccagatgagcgtctcgcggattcaacgc
agagccacggacaagctccggcatattctctcctcccgttatgacgcctag
DBGET
integrated database retrieval system
