Paenibacillus dendritiformis: QJQ58_19815
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Entry
QJQ58_19815 CDS
T09074
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdy
Paenibacillus dendritiformis
Pathway
pdy03420
Nucleotide excision repair
pdy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QJQ58_19815 (helD)
03430 Mismatch repair
QJQ58_19815 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdy03400
]
QJQ58_19815 (helD)
Enzymes [BR:
pdy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QJQ58_19815 (helD)
DNA repair and recombination proteins [BR:
pdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QJQ58_19815 (helD)
MMR (mismatch excision repair)
Other MMR factors
QJQ58_19815 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
SLFN-g3_helicase
AAA_22
AAA_16
NACHT
ATPase_2
nSTAND3
AAA_11
T2SSE
ResIII
Rad17
DEAD
Motif
Other DBs
NCBI-ProteinID:
WGU92797
LinkDB
All DBs
Position
complement(4430113..4432473)
Genome browser
AA seq
786 aa
AA seq
DB search
MDPIHREWQLEEARAVEVMEKIEQRIIPLQEEMGTVKREVVDLRREFWDDVKVNLDDVNE
AIETHASLKQQAEVMAERERRHLHAAQQLDVWKRMAQSPYFARIDFREEGEAEAERVYIG
IGSFRDKDDNFLVYDWRAPVSSLYYDYSPGPAHYETPVGRLSGEMGLKRQFIITEGRFRG
MFDTGLTIGDELLRQILSRPSSAHLKSIVATIQREQNRIIRNEQKRLMVVTGPAGSGKTS
TALQRIAYLLYRYRDTLQADEIVLFSPNPMFNRYVSTVLPELGERNMRQTTYQEYVEYRL
ADSFRLEHPAEQMEYALSAGEQPEYAARMEGIRYKAGAAFFRVLGRYVERLGQEGMRFRD
LRFQDRTLISGEAMLRQFYELDASLSIPNRLSQIAEWLRGELVAAARRERKADWVEEEIE
LLDNEDYVRAFQELQRRQRYTEETFDDFDREREWLARQIVNERFKPLRADIKRFRFVDMP
AIYTQLFASPDIAASLAGEEGLPERWADICALTAERMNRGEMAVEDATPYLYLNECLEGF
HTNTSIRHVFVDEGQDYGVFQLHFLKRLFPRARFTVLGDEDQTIYPHAEGAAAVPLPSLA
EVFTAEETESFQLTRSYRSTRPIMELARRIIPGGERIDTFEREGPAPTLTGLQDREELNA
RVAARMRELLAAGHRNVALLCTTAQESREAYEALRDLIPLRLVHQETVTFEAGALVIPSY
LAKGVEFDAVVLYNASDEGYGRESERKLLYVACTRAMHELHIYYMGWPSPWLEGALAGAD
EGQAQA
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggacccgattcatcgggagtggcagttggaggaagcgcgggctgtcgaggtaatggag
aagattgagcagcgcatcattccgctgcaggaagagatgggcacggtcaagcgcgaagtc
gtggatctccgccgcgagttctgggacgacgtcaaggtcaatctggatgacgtgaatgaa
gccatcgagacgcatgctagcttgaagcagcaggcggaagtaatggccgagcgcgagcgc
aggcatcttcatgcggctcagcagcttgatgtgtggaagcggatggcgcaatccccttat
ttcgcgcggattgatttccgggaggagggggaagcggaggcagagcgagtgtatatcggg
atcggctcgttccgggacaaggacgacaacttcctcgtctatgattggcgggcgcccgtg
tccagcctgtattacgactattcgccgggcccggcccactatgagacgccggtcggccgc
ctgtcgggggagatggggctcaagcgccaattcatcatcacggagggccggttccggggc
atgttcgatacggggcttacgattggcgacgagctgctgcggcagattctcagccggccg
tccagcgcccatctgaaaagcatcgtcgcgacgatccagcgggagcagaaccgcatcatc
cgcaacgagcagaagcggctcatggtcgtcaccggcccggcgggcagcggcaagacgtcg
accgccctgcagcggattgcgtatttgctgtaccggtaccgggatacgctgcaggccgat
gagatcgtgctgttctcgccgaatccgatgttcaatcgctatgtctcgaccgttctgccg
gaattgggggaacggaacatgcgtcagacgacgtatcaggagtatgtggaataccggttg
gccgattccttccggctggagcacccggccgagcagatggaatatgcgctgagcgctggg
gaacaaccggaatacgcggcgcgaatggaagggattcgctataaagcgggagcggctttc
ttccgggtgctcgggcgctatgtggagcggctcggacaggaaggcatgcggttccgcgat
ctccgcttccaggatcggacgctcatatcgggggaagcgatgctgcgccaattttatgag
ctggacgcgtccctgtcgatcccgaaccggctgagccagatagcggagtggctgcggggc
gagctggtcgccgccgcccgccgggaacggaaggcggactgggtggaggaagagatcgag
ctgctcgacaatgaggattatgtaagggcgttccaggagctgcagcgccgccaaagatat
acggaggagacgttcgatgacttcgatcgcgaacgtgaatggctggcccgccagatcgtg
aatgagcgctttaagccgcttcgcgcggacatcaagcgattccgcttcgtcgatatgccg
gccatctacacgcaattattcgccagtccggacatcgcagccagcctggccggagaagaa
gggctgcctgagcgctgggccgacatctgtgctctgacggccgaacggatgaaccggggc
gagatggctgtggaggatgcgacgccatacttgtatttgaatgaatgtctggaaggcttt
catacgaatacgtcgatccggcatgttttcgtggacgaaggccaggactacggggtcttc
cagctccatttcctcaagcgcctgttccctcgtgcccggttcacggtgttgggggatgag
gatcagacgatttacccgcatgccgaaggagcggcggcggtgccgctgccgtcgttggcg
gaagtgttcacggccgaggagacggagtcgttccaactgacccgcagctatcgttcgacc
cggccgattatggagctggcccgccgcatcattccaggcggcgagcggatcgatacgttc
gagcgcgaaggtccggcgcccacgctgacaggactgcaggacagggaggaattgaacgcc
cgggtcgccgcgcggatgcgcgagctgcttgccgccgggcaccgcaatgtcgctctgctc
tgcacgacggctcaggagagccgcgaggcgtacgaggcgctgcgggatctcataccgctg
cggctcgttcatcaggagacggtgaccttcgaagcgggcgcgctggtcattccgtcgtac
ctggccaagggcgtcgagttcgatgccgtcgtgctgtacaatgcatctgacgaaggctac
ggccgggagagcgagcgcaagctgctgtatgtggcgtgcacgcgggcgatgcatgaactc
catatctactatatggggtggccgagtccgtggctggaaggcgcgcttgcgggagcggac
gaagggcaggcacaggcctga
DBGET
integrated database retrieval system
