Paenibacillus dendritiformis: QJQ58_20960
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Entry
QJQ58_20960 CDS
T09074
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
pdy
Paenibacillus dendritiformis
Pathway
pdy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QJQ58_20960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdy03400
]
QJQ58_20960
Enzymes [BR:
pdy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
QJQ58_20960
DNA repair and recombination proteins [BR:
pdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QJQ58_20960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WGU93016
LinkDB
All DBs
Position
complement(4699388..4699897)
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AA seq
169 aa
AA seq
DB search
MNPIPDHLAWGLDVLFVGFNPSPRSGETGHHYANPRNRFWTILYRAGLTPRLYRAEEDGE
LLTLGYGFTNIVARPTPTAADITAVEYAEGRKLLRRKIETYRPQTVCFVGKGVYEAYSGR
RGVGWGFQEEPVVEGVRDFVAPSSSGLVRMKLEEIVDIYAQLARQHDGE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgatacccgatcatctcgcctgggggctcgatgtgctgttcgtcggcttcaat
ccaagcccgcgctcgggagagacgggccatcattacgccaatccgcgcaaccgcttctgg
acgatcctgtaccgggccgggttgaccccacggttgtaccgggccgaggaggacggggaa
ttgcttacgctgggctacggcttcaccaacattgtcgcccggccgactccgacggcggcg
gacatcacggcggtcgaatatgcggaggggcgaaagctgctgcgccgcaaaatcgagacg
taccgtccgcaaaccgtatgcttcgtcggcaagggcgtctatgaagcgtacagcgggcgg
agaggagtgggatggggattccaggaggagccggtcgtagagggcgtgcgcgatttcgtg
gcgccgtcatcaagcggtctagtgcggatgaagttggaggagattgttgacatctatgcg
cagttggcccggcagcatgacggggagtga
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