Paenibacillus dendritiformis: QJQ58_21920
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Entry
QJQ58_21920 CDS
T09074
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pdy
Paenibacillus dendritiformis
Pathway
pdy03030
DNA replication
pdy03430
Mismatch repair
pdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QJQ58_21920 (dnaX)
03430 Mismatch repair
QJQ58_21920 (dnaX)
03440 Homologous recombination
QJQ58_21920 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdy03032
]
QJQ58_21920 (dnaX)
03400 DNA repair and recombination proteins [BR:
pdy03400
]
QJQ58_21920 (dnaX)
Enzymes [BR:
pdy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QJQ58_21920 (dnaX)
DNA replication proteins [BR:
pdy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QJQ58_21920 (dnaX)
DNA repair and recombination proteins [BR:
pdy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QJQ58_21920 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
DnaX_C
AAA_30
RuvB_N
AAA_5
AAA_22
TIP49
RCF1-5-like_lid
AAA_19
AAA_14
AAA_16
AAA_7
AAA_assoc_2
Rad17
AAA_2
AAA_28
AAA_24
ABC_tran
RNA_helicase
AAA_18
TsaE
Motif
Other DBs
NCBI-ProteinID:
WGU93183
LinkDB
All DBs
Position
complement(4891890..4893659)
Genome browser
AA seq
589 aa
AA seq
DB search
MGHIALYRAWRPQSFGDMVGQQHIIQTLQNSLRERRFSHAYLFSGPRGTGKTTAAKIMAK
AVNCEQGPGPEPCNECEACRRITAGAVMDVVEIDAASNRGVEEIRDLRDKVKYAPSEVRH
KVYIIDEVHMLTTEAFNALLKTLEEPPAHVMFILATTEPHRLPATIISRCQRFDFRRVTL
EEQVARLEQVCRDEGIEADRDSLIYIAKLSDGGMRDAISLLDQAASFTDGRLDYRQVLDI
TGGIPEEQFADIARAVQAGDVGSVLATVESMMQEGKSADKCMESLLYFFRDLLMMKMVPD
GEGLTDRLTRVEAFRELADAFEAASLFRIIDTLNRYQTDMKYAVQPQTLFEVALLQLAVQ
NQPGALSSQPEAGTAERQADRSDAVGSSSVVQQLQRQVASLEAKLNELAKARIPDGRSDG
GQAERAPAATRAPARVSRMAKQPPHFERYTASKDSSDSNRIRSNWGQVLQQVKEAGVTIH
AWLVNGEPVSALEDRVLVAFKNTIHRDTTEKPNNKQVIERVLSEVFGKPYQLDTMMLKDW
EEAAEKSAGEKEEPAFRLEPEGSEAEPAQEPWIDEALHMFGEDLVVIKE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgggacatattgcattgtatcgcgcttggcggccacagtcattcggtgacatggtcgga
caacagcatattattcagacattgcaaaactcgctgcgtgagcggcgattttcgcatgcc
taccttttcagcggtccccggggaaccggcaagaccactgctgcgaagatcatggccaaa
gcggtcaactgcgaacagggacccggtccggagccctgcaatgaatgcgaagcctgccgg
cgcatcactgccggggcggtcatggatgtcgtcgagatcgacgccgcatccaaccggggc
gtggaagaaattcgcgatcttcgggacaaggtcaaatacgcgccttccgaagtccgccac
aaagtgtatattattgatgaggttcacatgctcacgacggaggccttcaacgcgctgctc
aagacgctggaggaacctcctgcccatgtcatgttcattctggccacgacggagcctcac
cgcctgccggcgactatcatctcccggtgccagcggtttgatttccgcagagtgacgctg
gaggaacaggttgcccgactggagcaagtgtgcagggatgagggaattgaggcagaccgg
gacagtctgatctatatcgcgaagctgtcggatggcggcatgcgcgatgcgattagcctg
cttgatcaggcggcatccttcaccgacgggcgtcttgactaccgtcaagtcctggacatc
accggcggcataccggaggaacagttcgccgacatcgcccgtgccgttcaagcgggggat
gtaggatccgtgctggccacggtggagtcgatgatgcaggaagggaagagcgcggacaag
tgcatggagagtctgctctactttttccgggatctgttgatgatgaagatggtgccggac
ggagaaggactgacggatcggctgacgcgtgtggaagcgttccgggagctggctgatgct
tttgaagcagcgagcctgttccggattatcgacacattgaaccggtatcagacagacatg
aaatatgcggtgcaaccgcaaacgttattcgaggtagccttgctgcaattagccgtgcag
aaccaaccgggggcgctgagcagccaaccggaggcgggaacggccgaacggcaggccgat
cgttccgatgcggtgggatcttcttccgtcgtgcaacaattgcagcgtcaagttgcgtca
ttagaagcgaagctgaatgaattggcgaaggcgagaataccggacgggcggtcagacggc
ggacaggccgaacgtgccccggcggccaccagagcgcctgcgcgggtatcgcggatggcg
aagcagccgcctcacttcgaacgatacactgcctcgaaggattcttctgactcgaaccgc
atccgctccaattgggggcaggtgcttcagcaggtgaaggaagccggcgtcacgattcac
gcttggcttgtcaatggggaaccggtatcggcactggaagatcgggtgctggtcgccttc
aaaaatacgattcaccgggataccaccgagaagcccaacaacaagcaggtgattgagcgt
gtcctgtccgaagtgttcggcaagccgtatcagctcgatacgatgatgctgaaggattgg
gaagaggcggcggagaagtctgccggagagaaggaagagccggcgttccggctggagccg
gaaggctccgaagcggaaccggcgcaagaaccttggattgacgaggcgctccacatgttc
ggggaagacctcgttgtcataaaagagtaa
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