Paenibacillus dendritiformis: QJQ58_27110
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Entry
QJQ58_27110 CDS
T09074
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pdy
Paenibacillus dendritiformis
Pathway
pdy00521
Streptomycin biosynthesis
pdy00523
Polyketide sugar unit biosynthesis
pdy00541
Biosynthesis of various nucleotide sugars
pdy01100
Metabolic pathways
pdy01110
Biosynthesis of secondary metabolites
pdy01250
Biosynthesis of nucleotide sugars
Module
pdy_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QJQ58_27110 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QJQ58_27110 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QJQ58_27110 (rfbC)
Enzymes [BR:
pdy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
QJQ58_27110 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WGU94126
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All DBs
Position
6087528..6088097
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AA seq
189 aa
AA seq
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MKIISTSLDGVLMLEPQVFEDGRGFFMESYHREKWEASGIPQTFVQDNHSLSARAGTIRG
LHYQLEPMAQTKLVRVLAGAIYDVAVDIRRGSPRFGQWIGVILSAANKRQLLIPPGYAHG
FCSLVDDTEVMYKVDAHYAPEWDRGIRWDDPALGIPWPASNPIMSDKDKALPLLEAAETF
FLSSLERGG
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcatatctacgtcgctggacggcgttttgatgttggagccgcaggtgtttgaa
gacggacgcggcttttttatggaaagctatcatcgcgaaaaatgggaggcttccggtatt
ccgcagacgttcgtgcaggataatcattcgctctctgcccgggccggcacgattcgcggg
ctgcattatcagttggagccgatggcgcagacgaagctggtgcgggtgctcgccggcgcc
atctacgatgtggcggtcgatatccgccggggctctccgcggttcggccaatggatcggc
gtgattctgagcgcggccaacaagcgtcagctcctgattccgccgggctatgcccacgga
ttctgcagcttggtggatgataccgaggtgatgtacaaggtggatgcccactatgcgccg
gaatgggatcggggcatccggtgggatgatcccgccctcgggattccgtggccagcatcg
aatccgataatgtcggacaaggacaaggcgctgccgctgctggaagccgccgagacgttc
ttcctgtccagtctggaacgaggtggatga
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