Phytobacter diazotrophicus: HHA33_00380
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Entry
HHA33_00380 CDS
T06586
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HHA33_00380 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdz03400
]
HHA33_00380 (uvrA)
DNA repair and recombination proteins [BR:
pdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HHA33_00380 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HHA33_00380 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
NACHT
Viral_helicase1
T2SSE
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
QJF15094
LinkDB
All DBs
Position
81528..84353
Genome browser
AA seq
941 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLAQPEGKRLMLLAPVIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVREDLAQRLAESFETALELSGGTAVVADMDDP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWDSLSPTVHKVVLFGSGKESIEFKY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCATCDGTRLRREARH
VFVENTPLPTISDMSIGHAMDFFNNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGPLEAIMAVPESLTGQYMSGKRQIAV
PKNRVKADPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPMLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagtacggggcgcgcgcacccataatctcaaaaacatcaacctcgtc
attccacgcgacaaattgattgtcgttaccggtctgtcgggttcgggtaaatcgtcactg
gctttcgacactctgtatgccgaagggcagcgtcgctacgttgagtctctttccgcttat
gcccgtcagtttctttcgctgatggaaaagcctgacgttgaccacattgaagggctctct
cctgctatttctatcgagcagaagtcgacctcgcataacccgcgttccaccgtcgggacc
attaccgaaattcacgactatctgcgtctgttgtttgctcgcgtaggtgaaccgcgctgc
ccggaccatgacgttccgctggcggcacagaccgtgagccagatggtcgacaatgtgctg
gcgcagccggaaggcaaacgtctgatgctgctggcgccggtaatcaaagaacgtaaaggt
gaacacaccaaaacgctggaaaacctggcaagccagggttatatccgcgcgcgtattgac
ggtgaagtctgcgacctttccgatccgccgaagctggagctgcaaaagaaacacaccatt
gaagtcgtgattgaccgctttaaagtgcgcgaggatctggcgcagcgtctggcagagtcc
ttcgaaacggcgctggagctttccggtggcacggcagtggtcgccgacatggacgatccc
aaagccgaagagctgcttttctcggccaatttcgcctgcccgatttgcggctacagtatg
cgcgagctggaaccgcgcctgttctcgttcaacaacccggcaggcgcctgcccgacctgt
gacgggctcggcgtgcagcagtatttcgaccctgaccgcgtgattcagaaccccgagcta
tcgctggcgggtggcgcaattcgcggctgggatcgccgtaacttctactatttccagatg
ctgaaatcgctggcggaccactacaaatttgatgtggaagcgccgtgggacagcctcagc
ccaaccgtgcataaagtggtgctgttcggatccggcaaagagagtattgaattcaagtat
atgaacgatcgtggcgatacctccgtgcgccgccatccgttcgaaggcgtgctgcacaat
atggaacgtcgctataaagagacggagtccagcgcggtacgcgaagagctggcgaaattt
atcagcaaccgtccctgcgccacttgcgacggtacgcgcctgcgccgcgaggcccgccat
gttttcgttgaaaatacgccgctgccaaccatctcggacatgagcatcggtcacgctatg
gacttcttcaataacctgaagctgtccggccagcgcgcgaaaatcgctgaaaaagtactc
aaagagattggcgatcgcctgaaattcctggtgaacgtcggtctgaattacctgacgctt
tcccgttccgcggaaaccctttccggcggtgaggctcagcgtatccgtctggcaagccag
attggcgcaggtctggtgggcgtcatgtatgtgctggatgagccgtcaatcggcctgcat
cagcgtgataacgaacgtctgctcggtacgctgatccacctgcgtaatctcggcaacacg
gtcatcgtggtcgaacatgatgaagatgccattcgcgccgcagatcatgtgatcgatatt
ggccccggcgcaggggtgcatggtggtcaggtcgtcgccgaaggcccgctggaggcgatt
atggcagtgcctgaatccctcaccgggcagtatatgagcggcaaacgccagatcgccgtc
ccgaaaaatcgcgttaaagccgatccggaaaaagtgcttaaactgacgggcgcgcgcggc
aataacctgaaagacgtgacgctgacgctaccggtagggctgttcacctgtattaccggt
gtttccggttcgggtaaatccaccctgattaacgacacgctgttcccgatcgctcagcgc
cagttaaacggtgccaccatcgccgaacccgcgccttatcgtgatattcaggggctggaa
catttcgacaaagtgatcgatatcgaccagagcccgattggccgtacgccacgttccaac
ccggcgacctataccggcgttttcaccccggttcgtgaactgtttgccggcgtgccggaa
tcccgttcgcgcggctacaccccaggacgtttcagttttaacgtccgtggtggacgctgc
gaagcctgtcagggtgacggcgtaatcaaagttgagatgcacttcctgccggatatctac
gtgccgtgcgaccagtgcaaaggcaagcgctataaccgcgaaacgctggagattaaatac
aaaggcaaaaccatccatgaagtgctggatatgaccatcgaagaagcccgtgaattcttt
gatgccgtcccggcgctggcgcgcaagctgcaaacattgatggacgtgggcctgacgtac
atccgtctgggtcagtcagccaccacgctttccggcggtgaggcgcagcgcgtgaagctg
gcgcgcgagctgtcgaaacgtggcaccggccaaacgctctatattctggatgaaccgacc
accggcctgcactttgccgatattcagcaactgctggacgttctgcaccagttgcgtgac
cagggcaataccatcgtggtcattgagcataacctggacgtcatcaaaaccgcagactgg
attgtcgatctcggtccggaaggcggcagcggaggcggggaaattctcgtgtccggcaca
ccagaaaccgtcgccgagtgtgaagcctcacacacggcgcgattcctgaaaccgatgctg
aaataa
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