Phytobacter diazotrophicus: HHA33_00575
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Entry
HHA33_00575 CDS
T06586
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdz03000
]
HHA33_00575
Transcription factors [BR:
pdz03000
]
Prokaryotic type
Other transcription factors
Others
HHA33_00575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_16
AAA_22
MCM
AAA_19
T2SSE
NACHT
AAA_2
AAA_14
ATPase_2
AAA_7
ABC_tran
AAA_30
AAA_33
AAA_18
NPHP3_N
TsaE
BrxC_BrxD
AAA_25
NTPase_1
PIF1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QJF15128
LinkDB
All DBs
Position
122978..124558
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AA seq
526 aa
AA seq
DB search
MQKRRVVIGVLGTVLDKRGKRSHRFRKWRPTVGLCQQPDFPVDRLELLHQPRDEGMAQQL
AEDIALLSPQTTVRPHTVNIRDPWDFEEVYAAFLDFASHYDFDTENEEYLVHITTGTHVA
QICWFLLTEARYLPASLLQTSPAPKGASEEDVAAGVYSVIDLDLSRYATLTSRFQREQQQ
SVSLLKAGIDTRNTTFNKLIDQIERVALRSTAPILLTGPTGAGKSFLAKRIYQLRQSRHR
VAGKLVAVNCATLRGDNAMSTLFGHVKGAFTGALTPRMGLLREADGGVLFLDEIAELGLD
EQAMLLKAIEEKTFFPFGSDKEVHSDFQLIAGTHRDMRQWVMEGKFREDLYARINMWTFA
LPGLAERREDIAPNIEFELQRFCSEAQTHIRFDKDAREHYLAFACSGQAQWRGNFRELSS
SIARMATLAEQGRITLSIADEEISRLQHAWQTPSALPPLAEEVDLFDQRQLETVLEVCRR
HHSLSDAGRELFAVSRLKKARPNDADRLRKYLARFGLNWENVRPAT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcgcagagtggtaattggcgtactgggaacggtgttggataaacgcggcaag
cgatcacatcgttttcgcaaatggcgaccaaccgttgggttatgccaacagccggatttt
ccggttgatcgactggagctgctccaccagccgcgcgacgaaggaatggctcaacaactg
gcggaagatatcgcgctgctttcaccgcaaaccactgtgcgccctcatacggtgaatatt
cgcgatccctgggattttgaagaggtatacgccgcgtttctggatttcgccagccactac
gatttcgatacggaaaatgaagagtatctggtgcatatcaccaccggcacgcacgtggcg
cagatctgctggtttttgctgacggaggcccgctacctgcccgccagcctgctgcaaacc
agcccggcaccgaaaggggcttctgaggaggatgttgccgccggcgtttactcggttatc
gatctcgatttaagccgctatgcgaccttaaccagccgctttcaacgcgaacaacaacag
tcggtctcgctgctgaaagccggtatcgatacacgcaatacaacgtttaataagctcatc
gatcaaattgaacgggtagccttgcgctcaacggcccccattcttctcaccgggcctacc
ggcgccggtaaatcctttctggcaaaacgtatttatcagttgcgccagtcgcgccaccgc
gtcgcgggtaaacttgtcgccgttaactgcgccacactgcgcggcgataacgccatgtcg
accttgtttgggcatgtcaaaggggcctttaccggcgcgctaacgccgcgaatggggctg
ctgcgcgaagccgatggcggtgtgctgtttctggatgaaatcgctgaactgggtctggat
gagcaggccatgctgttgaaagccattgaagaaaaaacgttcttcccctttggctcagat
aaagaggttcacagtgatttccagcttatcgccggaacgcaccgcgatatgcgccagtgg
gtgatggaaggaaaattccgtgaagatctttacgcgcgtatcaatatgtggacttttgct
ctgccggggcttgcagaacggcgggaagatatcgcgccgaatattgaattcgaactccag
cgcttttgtagcgaagcccagacgcacatccgtttcgacaaagatgcacgggaacattat
ctggcatttgcctgttccgggcaggcgcagtggcgcggcaactttcgtgagctgagttcc
tcgattgcccgtatggcgacgctggccgaacaggggcgcattaccctttctatcgccgac
gaagaaatcagccgtttgcagcacgcctggcagacgccttccgcacttccccctttagca
gaggaggtcgatctgtttgatcaacgccagttagaaaccgtactggaggtttgtcgtcgt
caccactctctttccgatgccgggcgcgagttgtttgccgtttcgcgcctgaaaaaagcc
aggccgaatgatgctgaccgtctgcgtaaatacctcgctcgcttcggtctgaactgggaa
aacgtccgcccggcgacatga
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