Phytobacter diazotrophicus: HHA33_01120
Help
Entry
HHA33_01120 CDS
T06586
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz03420
Nucleotide excision repair
pdz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HHA33_01120 (uvrD)
03430 Mismatch repair
HHA33_01120 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdz03400
]
HHA33_01120 (uvrD)
Enzymes [BR:
pdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HHA33_01120 (uvrD)
DNA repair and recombination proteins [BR:
pdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HHA33_01120 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HHA33_01120 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QJF15221
LinkDB
All DBs
Position
complement(239524..241686)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAASRSNMLVLAGAGSGKTRVLVHRIAWLMTVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGIRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKNLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQESGGALEHCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQATRELLQEKVLAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVVKDSGLWMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEAYHRPSRFIGELPENCVEEVRLRATVSRPVSHQRLG
APISENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgtgatgcggtcgccgcg
tcgcgtagcaatatgctggtgctggccggggcaggcagtggcaagacgcgcgtgctggtg
catcgcatcgcctggctgatgaccgtggaaaactgctcgccgtactccattatggcggtg
accttcaccaacaaagcggcggcggagatgcgccaccgtatcggccagcttatggggacc
agccagggcggtatgtgggtgggtacttttcacgggctggcgcatcgcctgctgcgtgcg
caccatatggacgccaacctgccgcaggatttccagatcctcgacagcgaagaccagtta
cgtttgcttaagcgtctgatcaaggcgatgaaccttgatgagaagcagtggccgccgcgc
caggccatgtggtacatcaacggccaaaaagatgaaggcattcgcccgcaccatattcaa
agctacggtaacccggtcgagcagacctggcagaaggtttatcaggcctatcaggaagcc
tgcgatcgcgccgggctggtggatttcgccgagctgctgctgcgtgcccatgagctgtgg
ctcaataagccgcatatcctgcagcactaccgcgaacgttttaccaatatcctggtggat
gagttccaggataccaacaacattcagtatgcctggatccgcctgctggcaggcgacacc
ggcaaagtcatgattgtcggcgacgatgatcagtcgatttacggctggcgtggggcgcag
gtggaaaatatccagcgcttcctcaatgacttccccggtgcgcagacgatccgcctggag
cagaactaccgctcaaccagcaatattctcagcgcggcgaacgcccttatcgaaaacaac
aacgggcgtctggggaaaaacctgtggaccgacggtgccgatggcgagccgatttcactc
tattgcgctttcaacgagctggatgaggctcgttttgttgttaaccgtattaaaacctgg
caggagagcggcggtgcgctggagcattgcgccattctctatcgcagtaacgcccagtcc
cgtgtgctggaagaggcgttattacaggcaagcatgccgtatcgtatttacggtgggatg
cgcttctttgaacgtcaggaaatcaaagacgcactctcttatttgcgtctgattgcaaac
cgaaatgatgatgccgcctttgaacgtgtggtgaatacgccgacgcgtgggatcggtgac
agaacgctggacgtggtccgccagacttcgcgcgatcgtcaactgacgctgtggcaggcg
acacgcgaactgttgcaggaaaaagtgctggccggtcgcgcggcaagtgcattacagcgc
tttatggagctgattgacgcgctggctcaggagacggctgacatgccattgcacgtacaa
acggaccgcgtggtgaaagattccggcctgtggatgatgtacgagcaggagaaaggcgag
aaaggccagacgcgtatcgagaacttagaggaactggtcacggcaacgcgccagttcagc
tacaacgaagaagatgaagatctgatgccgttacaggctttcctctcccatgccgcgctg
gaagcgggcgaagggcaggcggatacctggcaggacgcagtacaactgatgaccctgcac
tccgccaaggggcttgagttcccacaggtgtttattgtcgggatggaagaggggatgttc
ccgagccagatgtcgctggatgaaggcggccgtctggaagaggaacgtcgcctggcctat
gtcggcgtgacccgtgcgatgcagaagctgacgctgacttatgccgaaacccgccgtctg
tatggcaaagaggcctatcaccgtccatcgcgctttatcggcgagttgccagaaaactgt
gtcgaagaggtgcgcttgcgcgctaccgtcagccgtccggtcagccatcaacgccttggc
gcgccgatttcagagaacgacacgggctataaactgggacagcgtgtgcgtcatccgaag
ttcggtgaagggacaattgttaatctggaaggcagcggcgagcacagccgtttgcaggtg
gcattccaggggcagggcattaaatggctggtggctgcttatgcacgtcttgaaacagtg
taa
DBGET
integrated database retrieval system
