Phytobacter diazotrophicus: HHA33_01140
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Entry
HHA33_01140 CDS
T06586
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz00300
Lysine biosynthesis
pdz00470
D-Amino acid metabolism
pdz01100
Metabolic pathways
pdz01110
Biosynthesis of secondary metabolites
pdz01120
Microbial metabolism in diverse environments
pdz01230
Biosynthesis of amino acids
Module
pdz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HHA33_01140 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HHA33_01140 (dapF)
Enzymes [BR:
pdz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HHA33_01140 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QJF19725
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Position
complement(244193..245017)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPDLIRRMADRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDELVRVNMGE
PNFEPSQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAPVETLGPVME
SHERFPERANIGFMQVVKRDHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGQPLFMTGPAAHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctctaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcccctgatctgatccgtcgtatggctgacaggcatctcggggtg
gggttcgatcaactgctggtggtcgaacccccctacgatcccgaactcgatttccactat
cgcatctttaatgctgacggcagcgaagtctcccagtgcggaaacggcgcacgttgtttt
gcccgttttgtgcgcttaaaagggttgaccaataaacgtgacattcgcgtcagcaccgcg
aacggccgcatggtattaaccgtaacggatgacgagctggtgcgcgtgaacatgggcgaa
cccaacttcgagccatcgcaggttccgttccgggcgaacaaagcggaaaagacctatatt
atgcgtgcggcggaacaaacaatattgtgcggcgttgtctcaatgggcaatccgcactgt
gttatccaggtcgatgatgtcgataccgctccggttgaaacgctggggccggtaatggag
agccacgaacgctttcctgagcgcgccaatattggtttcatgcaagtggtcaaacgcgat
cacatccgactgcgcgtgtatgaacgcggcgcgggggaaacgcaggcctgcggaagcggc
gcttgcgcggcggtcgcggtcggtatccagcaaggtttgctggcagaagaagtacgtgtg
gaactcccaggcggtcggctggatatcgcatggaaaggaccgggccaaccgttgtttatg
actggcccggcggcacatgtctacgacggatttattcatctatga
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