Phytobacter diazotrophicus: HHA33_03080
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Entry
HHA33_03080 CDS
T06586
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HHA33_03080 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdz02000
]
HHA33_03080 (xylF)
Transporters [BR:
pdz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
HHA33_03080 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
QJF15580
LinkDB
All DBs
Position
complement(654247..655239)
Genome browser
AA seq
330 aa
AA seq
DB search
MKIKNLCLTLCASLLLASMAGHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGATVFV
QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINNAD
IDFYISFDNEKVGELQAQSLVSKVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYIDSGK
IKIVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLAGKVV
ISGQDADLAGIKRLINGSQTMTVYKPITQLANTAAEIAVELGNGKQPKADSTLNNGLKDV
PARLLTPIEVTKDNIDATVIKDGFHQKDQL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaagataaagaacctttgccttactttgtgtgcttctttgctgctcgccagcatggcg
ggtcacgcaaaagaagtaaaaatcggtatggcgattgatgacttacgcctcgaacgttgg
cagaaagaccgtgatattttcgtgaaaaaagccgaatcgctgggtgctacggtttttgtc
cagtcggctaacggtaatgaagaaacccagatgtcgcaaatcgaaaatatgatcaaccgc
ggcgttgatgttctggttattattccctacaacggtcaggtattaagtaatgttgtaaaa
gaggccaaacaagaagggattaaagtgttggcttatgaccgtatgatcaataatgccgac
attgatttttatatttccttcgataatgaaaaggttggtgaattgcaggcgcaaagcctg
gtcagcaaagtgcctcagggcaattactttttgatgggcggttcgcccgttgataataac
gctaagttgttccgcgcaggccaaatgaaagtattaaaaccgtacattgatagcggcaag
attaaaattgtcggcgatcagtgggtcgacggctggctgcctgaaaatgcgctgaaaatc
atggaaaacgccctcacggcgaacaacaacaaaatcgacgcggtcgtggcgtctaacgat
gcgaccgcaggcggcgcaattcaggcgctgagcgctcaaggcctggcaggcaaggtcgtc
atttcaggccaggatgccgacctcgccgggattaaacgcctgatcaacggcagccagacc
atgacggtctataagcccatcacccaactggctaacacggccgcagaaatcgccgttgag
ctcggtaatggcaaacagccaaaagcggactccaccctcaataacggtctgaaagacgtc
cccgcccgtctgctgacgccgattgaagtcaccaaagacaacatcgacgccacggttatc
aaagacgggttccatcagaaagatcagctctaa
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