Phytobacter diazotrophicus: HHA33_03915
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Entry
HHA33_03915 CDS
T06586
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdz03021
]
HHA33_03915 (rpoH)
Transcription machinery [BR:
pdz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HHA33_03915 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_3
HTH_10
SANT_DAMP1_like
UCR_14kD
HTH_25
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QJF15738
LinkDB
All DBs
Position
845415..846272
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AA seq
285 aa
AA seq
DB search
MTKEMQTLALAPVGNLESYIRAANAWPMLTADEERALAEKLHYQGDLEAAKKLILSHLRF
VVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM
TFDMSPDDESSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANKLTDAMQGLDERSQAI
IRARWLDEENKTTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctttagcccctgttggtaacctggaatcttatatc
cgggccgctaacgcatggccgatgttgacggctgatgaagaaagggcactggctgaaaag
ctgcattaccagggcgatctggaagcagctaagaagctgatcctgtcacacctgcgcttt
gttgttcatattgctcgtaactattcgggctatggtctgccgcaggcggatctgatccag
gaaggtaatatcggcctgatgaaagccgtacgtcgcttcaacccggaagtgggtgtgcgc
cttgtctctttcgccgtgcactggattaaagctgagattcacgaatacgtgctgcgtaac
tggcgtattgtgaaagtcgcgaccacgaaagcacagcgtaagttgttctttaacctgcgt
aaaaccaagcagcgtctgggctggtttaaccaggacgaagtggaaatggttgcccgtgaa
ctgggcgtgaccagcaaagacgtgcgtgaaatggaatcacgtatggcggcgcaggacatg
actttcgatatgtcgccagatgatgaatcttccgatagccagcctatggcaccggtactc
tatctgcaggataaatcgtctaactttgcggatggcattgaagacgacaactgggaagag
caggctgctaataagctgacggatgcgatgcagggtctcgacgagcgtagccaggccatt
attcgtgctcgctggttggatgaagagaacaaaacaacgctgcaggaactggcagatcgt
tacggtgtttccgctgagcgtgtgcgtcagttggaaaagaacgcgatgaagaaactgcgt
gccgcgatcgaagcgtaa
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