Phytobacter diazotrophicus: HHA33_04425
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Entry
HHA33_04425 CDS
T06586
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdz03000
]
HHA33_04425
Transcription factors [BR:
pdz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HHA33_04425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QJF15835
LinkDB
All DBs
Position
complement(960631..961563)
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AA seq
310 aa
AA seq
DB search
MNPDITSDLTFRKLAIFMAFMEKGNIARAAEALNLSGVSVHRALHTLEENVRCPLFVHKG
RNLLPLPAAWTLLEYCQEATQIMERGLAEARKMAGIGQNRLRVGTLYSLTLETVPQLIMG
MKLRRPELEMDLTMGSNETLLHKLEEGSLDAILISISESELDSANLEMLPLFHDEIFLAA
PAAAKLNTSAPADLRDYRQQKFVALAEGFATYAGFQEAFHIAGFEPEIVTRVNDIFSMLS
LVQAGVGFTLMPGRMKKVYENSVQLLKLAQPYQMQQQIAIVFARNREHDPNLLALAAEGR
MYARNRQDNA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgacatcaccagtgatctcacctttcgcaagctggccatttttatggccttc
atggagaaaggcaatatcgcccgagccgccgaggcgctgaaccttagcggtgtgagcgtg
catcgcgcgctgcatacgctggaggagaacgtacgctgcccgctgtttgtccacaagggg
cgtaacttattgccccttccggcggcctggacattactggagtattgccaggaggccacg
caaatcatggagcgcggtctggcagaagcccgcaagatggcgggtatcggccagaatcgt
ttgcgcgtcggcaccctctattcactcacgctggaaaccgtcccccagttgatcatgggg
atgaagctgcgccgcccggaacttgagatggatttgacgatggggtcgaacgagaccctg
ttacataaactggaggaaggatcgctggacgcgatactgatctcgatttctgaatcggaa
ctggattcagccaacctcgaaatgctgccgctcttccacgatgaaatctttctggctgca
ccggcggccgcgaaactgaatacctccgctccagccgatttacgcgactatcgccagcaa
aaattcgtcgctctcgccgaagggtttgccacctacgccgggtttcaggaagccttccat
atcgccgggtttgagccagagattgtgacgcgggtgaatgatatcttttctatgctgagc
ctggtgcaggcgggcgtgggcttcacgttgatgccggggcgaatgaagaaggtgtatgag
aattccgtgcagctactcaaactcgcacagccctaccagatgcagcagcaaatagccatt
gtctttgcccgcaaccgcgagcatgacccgaacttactggcgctggcggcggaaggccgt
atgtacgccagaaatcggcaggacaacgcctga
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integrated database retrieval system
