Phytobacter diazotrophicus: HHA33_05295
Help
Entry
HHA33_05295 CDS
T06586
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HHA33_05295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdz03019
]
HHA33_05295
03009 Ribosome biogenesis [BR:
pdz03009
]
HHA33_05295
Enzymes [BR:
pdz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HHA33_05295
Messenger RNA biogenesis [BR:
pdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HHA33_05295
Ribosome biogenesis [BR:
pdz03009
]
Prokaryotic type
rRNA helicases
HHA33_05295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QJF15991
LinkDB
All DBs
Position
1114149..1116068
Genome browser
AA seq
639 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAEIPDG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD
LETLAAALLKMAQGERALIVPPDAPMRPKREFRERDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPERRGGGERREGGRSFGGGERREGGRS
FGGERREGGRSEGRNFSGERRAPRRDREEGSSRRRFGDA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccaatccaggcagagtgcattccgcatctg
ctgggcggtcgcgacgtactgggtatggcccagacgggtagcggcaaaaccgcagcgttt
tcattaccgctgctgaacaatcttgatcctgagctgaaagcaccgcaaatcctggtgctg
gcgccgacccgcgaactggcggttcaggttgccgaagccatgacagatttctctaaacac
atgcgcggcgtgaacgtggttgccctttatggcggccagcgttatgacgtgcagttacgc
gccctgcgtcaagggcctcagattgttgtcggtaccccgggtcgtctgcttgaccacctg
aaacgcggtacgctggatctctctaaactgagcggtctggtgctggacgaagccgatgaa
atgttgcgtatgggcttcatcgaagacgttgaaaccatcatggcagagatcccggacggt
catcagaccgcactgttctctgcaaccatgccggaagcgattcgccgcattacccgccgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtgactactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgtaaaaacgaagcgctggtacgtttcctg
gaagcagaagattttgatgcggcgatcatcttcgttcgtaccaaaaacgcgaccctggaa
gtggcagaagcgctggagcgtagcggctataacagcgccgcgctgaatggcgacatgaac
caggccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgttaactat
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcaggt
cgcgctggtcgtgcgttgctgtttgttgagaaccgcgaacgtcgtctgctgcgtaacatc
gaacgcaccatgaagctgactattccagaagtagaactgccgaacgcagaactgctgggc
aaacgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgtgctctgctggcgaaaatccagccgtctgcggaaggtgaagagctggat
ctcgaaacgctggccgctgctctgctgaaaatggcacagggtgaacgtgcgctgatcgtt
ccgccagacgcgccgatgcgtcctaagcgtgaattccgtgagcgtgacgaccgctttgaa
cgccgtggcgatcgtaacgaccgtggtccgcgtggcgaccgtcctgagcgtggtggtgaa
gatcgtccgcgtcgtgaacgtcgtgatgctggcgaaatggaactgtaccgtattgaagtt
ggccgtgatgatggtgttgaagttcgtcatatcgttggcgcgattgctaacgaaggcgac
atcagcagccgttatatcggtaacatcaagctgttcggtacccactctaccatcgaactg
ccgaaaggcatgccgggcgaagtactgcagcactttactcgcacccgcatcctgaacaag
ccgatgaacatgcagcttctgggtgatgcacagccgcgtcctgagcgtcgtggcggtggt
gagcgtcgcgaaggtggccgcagcttcggcggtggtgaacgccgtgaaggtggtcgcagc
ttcggtggtgagcgtcgtgaaggcggtcgtagcgaaggtcgtaacttcagtggcgaacgt
cgcgctccgcgtcgtgaccgcgaagaaggctccagccgtcgtcgtttcggtgacgcataa
DBGET
integrated database retrieval system
