Phytobacter diazotrophicus: HHA33_07455
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Entry
HHA33_07455 CDS
T06586
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdz03016
]
HHA33_07455 (truD)
Enzymes [BR:
pdz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HHA33_07455 (truD)
Transfer RNA biogenesis [BR:
pdz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HHA33_07455 (truD)
Prokaryotic type
HHA33_07455 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QJF16393
LinkDB
All DBs
Position
1577103..1578152
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AA seq
349 aa
AA seq
DB search
MTGFDQLTYLHGKPAASGLLKANPEDFVVIEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQPEGCKVLEYARHKRK
LRLGALKGNSFTLVLREISNRDDVESRLQAIREGGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDFNQVVDGDALQLSGRGSWFVATAEE
RAELQTRVDDKALMITASMPGSGEWGTQGEALSFEQAAVADAPELQALLVREKVEASRRA
MLLFPQQLSWNWWDDVTVELRFWLPAGSFATSVVREIINTLGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcttcgaccagctaacctatttgcacggtaaacctgcggctagcggtttactg
aaagccaatccggaagatttcgtggttatcgaggacttaggcttcgaacccgacggtgaa
ggtgaacatattctggtgcgaattctgaaaaacggctgcaatacgcgctttgttgccgac
gcgctggcgaagttccttaaaatacacgcccgtgaagtcagctttgccgggcagaaagat
aaacacgcggtgactgagcaatggctgtgcgcgcgcgtgccgggtaaagagatgccggac
ctgagcgcgtttcagccggaaggctgtaaagtgctggaatatgcccgccataagcgcaaa
ctgcgtttaggcgcgcttaaaggcaacagtttcacccttgtgctgcgcgaaatcagcaac
cgggacgacgtggaatcccgcctgcaggcaatccgcgagggcggcgtaccgaactatttt
ggtgcgcaacgttttggcatcggcggcagcaatctacagggggcgctacgttgggctcaa
agcgatgccccggtgcgcgatcgtaataagcgcagtttttggttgtcggcggcacgcagt
gcattgtttaatcagattgttagcgagcgcctgaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattatcggggcgcggaagttggtttgtggcgaccgcagaagag
cgtgctgagctgcagacgcgcgttgatgataaagcgctgatgattaccgcctcaatgccg
ggaagcggcgaatggggaacgcagggcgaagcgctgtcatttgagcaggccgccgttgcc
gatgcgcctgagctgcaggcgttgctggtgcgtgaaaaggttgaggcgtcgcgccgcgca
atgttgctctttccgcaacaattaagctggaactggtgggatgacgtgaccgtcgagtta
cgcttctggctgccggcaggtagcttcgccaccagtgtggtaagggaaattatcaatact
ttgggtgattatgcgaatattgctgagtaa
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