Phytobacter diazotrophicus: HHA33_07475
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Entry
HHA33_07475 CDS
T06586
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdz03021
]
HHA33_07475 (rpoS)
Transcription machinery [BR:
pdz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HHA33_07475 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QJF16397
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All DBs
Position
1580874..1581866
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AA seq
330 aa
AA seq
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MSQNTLKVHDLNEDAEFDENGVEAFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYSNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQAQGLNIEALFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaatacgctgaaagttcatgatttaaatgaagatgcggaatttgatgagaac
ggagtagaggcttttgatgagaaagccttagttgaagaggaacccagtgataacgacctg
gccgaagaggaattgttatcgcagggcgctacccagcgagtgctggatgcgactcagctt
tatcttggggaaattggttattccccactgctaacggccgaagaagaagtttattttgca
cgtcgcgctttgcgtggtgacgttgcttctcgccgccgcatgatcgaaagtaacctgcgt
ctggtagtgaaaattgcccgtcgttatagcaatcgtggcctggcgttgctggacctgatt
gaagaagggaacctgggcctgatccgtgcggttgaaaaattcgacccggaacgtggtttc
cgtttctccacctatgcgacctggtggattcgtcagactattgaacgggcgattatgaat
caaacccgtactatccgtctgccaatccatattgttaaagagctgaacgtctatctgcgt
accgcgcgtgagttgtcccataaactggaccacgaaccgagtgcggaagagattgccgaa
caactcgacaagccggtcgatgatgtgagtcgcatgctgcgcctcaacgagcgtatcacc
tcggtggatacaccgctgggcggtgattccgagaaagcgctgctggatatcctggccgat
gaaaaagaaaacggcccggaagacacaacgcaagatgacgatatgaaacagagcatcgtc
aaatggctgttcgaactgaacgccaaacagcgtgaagtgctggcacgtcgtttcggtctg
ctgggatatgaagcagcaacgctggaagatgtgggtcgtgaaatcggtctgacacgcgag
cgcgttcgtcagattcaggttgaaggtctgcgccgtctgcgtgaaatcctgcaggcgcaa
ggtctgaatatcgaagcgcttttccgcgaataa
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