Phytobacter diazotrophicus: HHA33_08335
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Entry
HHA33_08335 CDS
T06586
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HHA33_08335 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdz03400
]
HHA33_08335 (ung)
Enzymes [BR:
pdz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HHA33_08335 (ung)
DNA repair and recombination proteins [BR:
pdz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HHA33_08335 (ung)
Prokaryotic type
HHA33_08335 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Tox-HDC
Motif
Other DBs
NCBI-ProteinID:
QJF16539
LinkDB
All DBs
Position
complement(1747176..1747865)
Genome browser
AA seq
229 aa
AA seq
DB search
MTTSLTWHDVLAEEKQQPYFINTLSAVATERQSGVTIYPPQKDVFNAFRFTELGDVKVVI
LGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELEQSVPGFVRPTHGYLESWAHQGVL
LLNTVLTVRAGQAHSHASLGWETFTDKVISLINEHREGVVFLLWGSHAQKKGAIIDGKRH
HVLKAPHPSPLSAHRGFFGCKHFVLANEWLEKHGQTPIDWMPVLPAESE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctcattaacatggcacgatgtgctggcagaagagaaacaacagccttacttt
atcaataccctcagcgcggtagcgacagaacggcagtccggtgtcaccatctatccgccg
caaaaagatgtcttcaatgcgttccgttttactgaactgggcgatgtcaaagtcgtgatc
ctcggtcaggatccctatcacggccccggtcaggcccatgggctggcattttcggtgcgt
cccggtatcgccatcccgccatcattactgaatatgtataaagagctcgaacagtcggta
cccgggttcgttcgaccgacgcatggttatctggaaagctgggcgcatcagggcgtgctg
cttctcaatactgtcttaacggtgcgcgccggacaggcgcactcccatgccagtcttggc
tgggagacctttaccgataaagtgatcagtctcatcaatgaacaccgtgaaggcgtggtg
tttttactttggggatcgcatgcgcagaagaaaggggcaattatcgacggtaaacgccac
catgtattgaaagcgccccacccgtcaccgttatccgcacacaggggcttcttcgggtgt
aagcactttgttctggcaaatgaatggctggaaaaacacggccagacaccgatcgactgg
atgcctgtgttaccggcggaaagtgaataa
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