Phytobacter diazotrophicus: HHA33_10880
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Entry
HHA33_10880 CDS
T06586
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HHA33_10880 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdz03400
]
HHA33_10880 (alkA)
Enzymes [BR:
pdz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HHA33_10880 (alkA)
DNA repair and recombination proteins [BR:
pdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HHA33_10880 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QJF17015
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All DBs
Position
2298522..2299370
Genome browser
AA seq
282 aa
AA seq
DB search
MYTLRWQPPYDWAWILEFLRLRTVSGVEVITQTTYTRSFALGEHRGVMSAEPDEATSTLK
VTLSDGLLPVADVCLQRLSQLFDLDCTPQVITDALGDVGAARPGLRLPGCVDPFEQAVRA
ILGQLVSVAMAAKLTSRVAALYGDRLDEQFVLFPQPAQLAQADPLALKALGMPVKRAESL
IFLAQSVLDGTFPLTMPDDVERGMKTLQTFPGIGRWTANYFALRGWQAKDVFLADDYLIK
QRFAGMTPAQIRRYAERWQPWRSYALLHIWYTEGWQPHLTVS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtacacactgcgctggcagccgccctatgactgggcatggatactggaatttttacgc
ttgcgtacggtttctggcgtcgaagtgattacccagacgacgtacacccgctcgttcgct
cttggcgagcatcgcggcgtgatgagcgccgagccggatgaggccacttcaacccttaaa
gttacgctgagcgatggcttgttgccggtggcagatgtctgtttgcagcggctgagccag
ctttttgatctcgactgtacgccacaggtcattaccgatgcgctcggggatgtgggggcc
gcgcgaccaggtctgcgccttcctggctgcgtggacccgtttgaacaggccgtccgcgca
attctgggccaactggtgagcgtggcgatggcggcaaagctgacctcccgcgtggcggct
ctgtacggcgacaggctggatgagcagttcgttctgttcccgcagcccgcgcaactggcg
caggcggatccgctggcgctcaaagcattaggcatgccggtaaagcgcgcggaatcgctg
atctttctcgcgcaatcggtgctggacgggacgtttcccctgacgatgccggatgatgtt
gaacgcgggatgaaaacgctacaaacctttccgggaattggccgctggacggcgaactat
ttcgctctgcgcggctggcaggcaaaagatgttttcctggcggatgattatctgattaag
cagcgttttgccggaatgacacccgcgcagattcgccgctatgccgagcgctggcagccg
tggcgttcttacgcgttgctgcacatctggtataccgagggctggcagccacatctcacc
gttagttaa
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