Phytobacter diazotrophicus: HHA33_11625
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Entry
HHA33_11625 CDS
T06586
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdz03400
]
HHA33_11625
DNA repair and recombination proteins [BR:
pdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
HHA33_11625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
QJF17146
LinkDB
All DBs
Position
2440734..2441198
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AA seq
154 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLASLLETLGLTYRVQDAALPGRPDFVLDEYRAV
IFTHGCFWHHHDCHLFKVPATRTEFWLEKIGKNVVRDKRDNALLHEQGWRVLIVWECALR
GRLKLTDDALGERLEEWICGGGDTAQIDTRGIHQ
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgtccacgataaggcgacgcgcagcaaaaacatgcgtgccattgccacccgt
gacacagcaattgaaaaacgacttgcttcgctactggaaacactgggcctgacgtatcgt
gtccaggatgcggcgttacccgggcgccctgattttgtgctggatgagtatcgcgccgtc
atttttacccatggctgtttctggcatcaccacgactgccatttatttaaagtccccgcg
acgcgaactgaattctggctggaaaaaatcggcaaaaatgtcgtgcgtgataagcgtgat
aacgcactattgcatgaacaggggtggcgggtcttaattgtctgggagtgtgcgttacgc
gggcggcttaaattaacggacgatgcgctgggggagcggcttgaagagtggatctgcggg
ggcggcgacaccgcgcagatcgacacacgtggcattcatcaatga
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