Phytobacter diazotrophicus: HHA33_16245
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Entry
HHA33_16245 CDS
T06586
Symbol
hns
Name
(GenBank) DNA-binding transcriptional regulator H-NS
KO
K03746
DNA-binding protein H-NS
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdz03036
]
HHA33_16245 (hns)
03400 DNA repair and recombination proteins [BR:
pdz03400
]
HHA33_16245 (hns)
Chromosome and associated proteins [BR:
pdz03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
HHA33_16245 (hns)
DNA repair and recombination proteins [BR:
pdz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HHA33_16245 (hns)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
DUF6626
PaaX_C
FapA_N
TetR_C_24
STX6_10_61_N
Motif
Other DBs
NCBI-ProteinID:
QJF18001
LinkDB
All DBs
Position
3393891..3394304
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AA seq
137 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNEHREEESAAAAEIEERTRKLQQ
YREMLIADGIDPNELLNSMVAAKTGTKAKRAARPAKYSYVDENGETKTWTGQGRTPAVIK
KAMDEQGKQLEDFLIQE
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaattctgaacaacatccgtactcttcgtgcgcaggcaagagaa
tgcactctggaaacgctcgaagaaatgctggaaaaattagaagtggtagttaacgagcat
cgtgaagaagaaagcgctgcagctgctgaaatcgaagaacgtactcgtaaactgcaacaa
tatcgtgaaatgctgattgctgatggtattgatccgaatgaactgctgaacagcatggtc
gcagctaaaaccggaactaaagctaaacgcgctgcacgtccggctaaatatagctacgtt
gacgaaaacggtgaaactaaaacctggactggccagggccgtaccccagcagtaatcaaa
aaagcgatggacgaacaaggtaaacaactggaagatttcctgatccaggaataa
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