Phytobacter diazotrophicus: HHA33_17470
Help
Entry
HHA33_17470 CDS
T06586
Name
(GenBank) glycohydrolase toxin TNT-related protein
Organism
pdz
Phytobacter diazotrophicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TNT
DUF6531
PAAR_motif
RHS
DUF6987
Motif
Other DBs
NCBI-ProteinID:
QJF18224
LinkDB
All DBs
Position
complement(3665303..3669760)
Genome browser
AA seq
1485 aa
AA seq
DB search
MSDKHAARKGDDIIHSSIFADITSIVAEGVAYAAIGSAVAGIAAVAAPFAGAGLAAAGLA
AVGSSCVLGGIIGGILTNVLGKADDISNAANKLGDWIFPPSPAGKIDNGSHNVLTNKLPA
ARAAGMLTPAGTPPPPEPQPPESFADYGGMLLSMAAQFGSNMWQPPVASAAEGTTALEED
KVKCEKHSPQQYLAEGSKSVFINNQPAARAKDRTTCEATISEEVSPNVIIGGETLTVRDI
KSGKFPGLAVIMAATALFRGRFGTILKSMPCALASAAGGMLTDMAINAVFGSSHPVHAAT
GVKVLNDEAEQDFSLPGRFPLVWQRSYNSLTRREGLFGLGWATAFDGYLQREGDNVTWFD
DTGRELSFTLPAINEALYSISEGLIIRRNEQGDVAIADDDGTVWRLFKPTRSDPSILRLA
SLSDEYGNMLETGWDEHGRLVRIHDAPCAIDVSLFYGDERFPTRVTEARHSDGQQSWLLT
RWRYDHRGQLAAVEDATGVVTREFRYNDDGLMVWHRMPGGLESEYRWQKFDHWRVVENRT
SSGDGCRFTYDLAAGLTTVEQYDGHKRQHYWNAQALITAFVDERGERWEFEWNDDEQLTR
RVDPLGHATTFVYDDMGNRIQEIDPDGNIQTTQWLAQRALPTAITMADGATTRFYYDEHH
GLARIVDPLGQSTLLKRDAFGQVVEEVDAAGNTRRQEYNEAGQIIRETDCSGRITRYRFY
PLGWLQSVKAPDGEETRYHYDAAGRPLQLERAEGWQESIGWNSRGLPEYHITPDGKRHEF
SWDDAGRLVATRNALGEEVRRRWDSRDRLTALQNENGEAYHFEWGADSLLLAETGLDGVA
TQYEYDACRRTVRRTFAAGHSQALTHAFRWGKAGQLLARSTPEGQTRYHYSANGQVTRVA
LHPPLGDDVWSQEAEQELIFTYDALGRVISEEGENGRLGWTYDALNNRTSVELPDGRHLK
YFYYGSGHLLSLALDNLPISDFTRDELHREVGRTQGLLTSRNEYDRLGRIHRRDVFTGNA
QRPAPARWSRRWDYDYRNNPVREERDDDPFNWCNWKYDSAGRLLEQDGTSPGKEQWRWDA
AGNPLDNSLQQSVRHNRLTRLNGIQWSYDIHGRTTEKDNGQTRWHYRYDGEHRLTDVVAV
PRDRNKPQTQVSFRYDPLGRRISKTRQQTLGGRPVGKQVTTRFLWEGFRLLQEIHDDVPL
TYVYSDAESYEPLARIDGTKDPDIFWFHCQPNGTPERMTDREGHIRWEGQNSAWGKLLHE
SIPQETGYAQNLRMQGQYLDRETGLHYNLFRYYDPDSARFTQQDPIGLAGGINLYQYAPN
ALSWVDPWGLSRCQNEWNSFQSRSKGAFKSRTIAAKAYKLWKKGNWKALEKLMGPGAWPP
NRGFIKATPITLTPGMKIDRYGGFIDGGVFHDRGTFVSPAGASFESRALPLDTLNKPYKV
YEVLAPIHADAGPAIPWFNQPGKGTQFELSKSISQLLAEGKIREI
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaagcacgcagcccgtaagggtgacgatatcatccattcaagtatcttcgct
gatatcaccagtattgtggccgaaggggtcgcttatgctgcgattgggtcggcggtagcc
gggatcgcggcggttgcggcaccctttgccggggcgggtctggcggcggcagggctggct
gccgtcggttccagttgcgtgcttggcggcattatcggggggattctcaccaacgtgctg
ggtaaggcggatgatatctccaatgcggccaataaactgggggactggattttccctcct
tctcccgccggaaaaattgacaacggttcgcacaacgtcctgaccaataagctgcccgct
gcgcgcgccgccggtatgctcacgcctgccggtacgccaccgccaccggaaccgcagcca
ccggaaagttttgccgattatggcggcatgctgctgtcgatggccgcacagtttggcagc
aacatgtggcaaccgccggttgcatccgctgccgaaggcaccacggcgctggaagaggac
aaggtgaagtgcgagaaacactcaccacagcagtatctggcggaggggtcaaaaagcgtc
ttcatcaataaccaacccgccgcacgcgccaaagaccgaaccacttgtgaagccaccatc
tcagaagaggtctcacccaatgtcatcattggcggtgaaacactcaccgtccgggatatt
aaaagcggcaagtttccgggcctggcggtcattatggcggcgacagcccttttccgagga
cgtttcggtaccatcctcaaatcaatgccttgtgcgctggcttccgccgccgggggcatg
ctgacggatatggcgattaacgccgtctttgggtcatcacatccggtccatgctgcaacc
ggcgtgaaagtcctgaacgatgaggcagaacaggactttagcttgccagggcgctttcca
ctggtctggcaacgtagttacaacagccttacccgccgcgaaggcctttttggcctgggc
tgggctaccgctttcgacggctacttacaacgggaaggcgacaacgtcacctggtttgac
gacaccgggcgtgagctcagctttacgctgcctgccattaacgaagcgctttacagcatc
agtgaagggttaatcatccgccgtaacgagcagggtgatgttgctattgccgatgacgat
ggtactgtgtggcgactgttcaaaccaacacgctctgacccatcaatattacgactggca
tcgctcagcgatgagtacggcaacatgctggaaaccggctgggatgagcatgggcggctg
gtgcgtattcatgatgccccctgtgccattgatgtctcgctgttttatggcgatgaacgt
ttcccgacccgggttaccgaggcccgccattcggatggtcagcaatcctggctgctgaca
cgctggcgctatgatcatcgtggtcaactggctgccgtcgaagatgcgacgggcgtggtg
acgcgtgaatttcgttataacgatgacggactcatggtctggcaccgtatgcctggcggg
ctggagagtgagtatcgctggcagaaatttgaccactggcgagtcgtggaaaaccgtacc
agtagcggagatggctgccgcttcacctacgatctggccgcgggattaaccaccgttgaa
cagtatgacggacacaagcgtcaacactactggaatgcgcaggctttaatcaccgcattt
gtcgatgaacgtggtgaacgctgggaattcgagtggaatgacgacgagcaactgacccgg
cgcgttgatcccctcggccatgccacgacctttgtctacgatgacatgggcaaccgtatc
caggaaatcgatccggacggcaatattcagacgacccagtggctggcgcagcgcgcgctg
ccgacggctatcaccatggccgatggcgccaccacccgtttttattatgatgagcaccac
gggctggcgcgcatcgtcgatccattggggcagagcacattgctcaagcgcgacgctttt
ggccaggtggtggaagaggtggatgcggcaggcaatacgcgtcgccaggagtataacgag
gccgggcagattatccgcgagacggactgctcggggcgtatcacccgttaccgcttttac
ccgctcggttggttgcagtcggtgaaagcgccggacggtgaagaaacccgctatcactat
gatgccgcaggtcgcccactgcaactggagcgggcggagggctggcaggagtctatcggc
tggaactcacgtggactaccggaataccatattaccccggacggtaagcgccacgagttt
agctgggatgacgcaggccggctggtggcaacccgtaacgcgttaggggaagaggtgcgc
cgtcgctgggacagccgcgacagattaacggcattacaaaatgaaaacggggaagcgtac
cattttgagtggggtgcggattcgctgctgcttgctgaaacagggctggacggtgtcgca
acacagtatgaatatgatgcctgccgacgcactgtgcgtcgtactttcgccgccgggcat
tcacaggctttaacgcatgcatttcgctggggcaaggcgggccaactgcttgcccgcagc
acgccggaagggcagacccgttatcactactctgcgaatgggcaggttacgcgagtggcg
ttacatcccccgctgggtgatgacgtatggagtcaggaagctgaacaggagctgatcttt
acctatgacgcgttgggacgtgttatcagtgaagagggtgaaaacggcaggctgggctgg
acttatgatgcgctgaacaaccgtacatcggtggagttacccgacgggcgtcatctgaaa
tatttctattacggaagcgggcatctgctgagcctggctctcgataatctgccgataagc
gactttacccgcgatgagttacaccgggaagttggccgtacgcagggcttgctgacaagc
cgcaatgaatacgatcgtctcggacgcatccatcgccgggatgtgttcaccggcaatgcg
cagcgtccggcacccgcacgctggtcacgccgctgggattacgactaccgcaacaacccg
gtgcgcgaagagcgtgatgatgatccgttcaactggtgtaactggaaatatgacagcgcc
gggcgtttgctggaacaggacggcacgtcccccggaaaagagcagtggcgctgggatgcg
gcgggtaacccgctggataacagcctgcagcagtctgttcgccataaccgtctcacccgc
ttaaatggcattcagtggagctatgacattcatgggcggaccaccgaaaaagacaacggg
cagacacgctggcactatcgttacgacggcgagcaccggttaaccgatgtggtggccgtc
ccgagggatcgtaacaaaccacaaacgcaggtcagtttccgctatgacccgctcggccgg
cgtatcagcaaaacacgccagcagacgctggggggcaggccggtaggaaagcaggtgacg
acacgttttctgtgggaaggttttcgcctgttgcaggaaattcacgacgatgtgcccctg
acttatgtctatagcgacgcggaaagttatgaaccgctggcgcgtatcgatggcacgaag
gatccggatatcttctggttccactgtcagccaaacggtacgccggaacggatgacggac
cgtgaaggacatatccgctgggaagggcagaacagcgcgtggggtaaactgctgcacgag
tcgataccgcaggagacgggctatgcgcagaacctgcgtatgcaggggcaatacctggat
cgtgagaccgggttgcactacaatttgttccgttattacgacccggatagcgccaggttc
acccagcaggacccgatagggctggcgggggggataaacctttatcagtatgcgccgaat
gcgttgagttgggtggatccttgggggctgagtcggtgccaaaatgagtggaatagcttc
caatccaggtccaaaggggcttttaaatctagaactattgcagcgaaggcttacaagctt
tggaaaaaagggaattggaaagcgttagaaaaactaatgggacctggtgcctggcctcct
aaccgtggttttatcaaagcgacaccaattactcttactccgggtatgaaaatagaccga
tatggtggctttattgatgggggggtattccatgatcgtggaacttttgtttcacctgcg
ggggcatcttttgagagccgtgcattaccattggatacgctgaataaaccatataaagtc
tatgaagttctcgcccctatccatgctgatgctgggccagcaataccttggtttaaccaa
ccaggtaagggaacacagttcgagctttctaaatctattagtcagcttcttgcagaaggt
aagataagagagatatga
DBGET
integrated database retrieval system
