Phytobacter diazotrophicus: HHA33_18275
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Entry
HHA33_18275 CDS
T06586
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdz03016
]
HHA33_18275 (cmoB)
Transfer RNA biogenesis [BR:
pdz03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
HHA33_18275 (cmoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_31
Methyltransf_25
Methyltransf_12
Methyltransf_11
CMAS
PCMT
Motif
Other DBs
NCBI-ProteinID:
QJF18371
LinkDB
All DBs
Position
3817883..3818854
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AA seq
323 aa
AA seq
DB search
MITFERFYQQIAVSPLSHWLETLPAQIAAWQRDQLHGQFKQWTNAVNFLPELTPSHLDLL
NSVTAESETPLSAGQLTRMETLLRNLMPWRKGPYSLYGINIDTEWRSDWKWDRVLPHLSD
LQGRTILDVGCGSGYHMWRMIGAGAKLAVGIDPTQLFLCQFEAVRKLLGDDRRAHLLPLG
IEQLPALNAFDTVFSMGVLYHRRSPLEHLWQLKDQLVKDGELVLETLVVDGDEHTVLVPG
DRYAQMRNVYFIPSAAALKNWLEKCGFVDVRIADVCATTTGEQRGTSWMVTESLADFLDP
NDHTRTIEGYPAPVRAVLIARKP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccttcgagcgtttttatcagcaaatcgccgtcagccccctgtctcactggtta
gaaaccctgccggcgcagattgccgcctggcaacgtgaccagcttcatggtcagttcaaa
cagtggaccaatgcggtgaatttcttacccgagctgacgccttcgcatctcgacttgctt
aatagcgtcaccgccgaaagcgaaacgccgttaagcgcagggcaactgacgcgcatggag
accctgctgcgcaatttaatgccgtggcgtaaagggccttactctctgtatggcatcaat
atcgacacggaatggcgttccgactggaaatgggatcgcgtgctgccgcacctgtctgac
ttgcagggccggactattctcgatgtaggctgtggcagtggttatcatatgtggcgcatg
attggcgcgggggcaaagctggccgtgggcatcgacccgacgcaactgttcctgtgtcag
tttgaagcagtgcgtaagctgttgggggatgatcgtcgcgcccatttattgccgctgggt
attgagcagcttccggcgctgaatgccttcgataccgtcttttcaatgggcgttctgtat
caccgtcgctcaccgctggagcacctgtggcagttgaaagaccaactggtgaaagacggt
gaactggtactggaaacgctggttgtcgacggtgatgagcataccgttctggtgccgggt
gatcgctacgcccagatgcgtaacgtctattttattccctcggcggcggcgctgaaaaac
tggcttgagaagtgcggctttgttgatgtccgtatcgccgatgtctgtgcgaccaccacc
ggggagcagcgtggtacgtcatggatggtgacggaatcactggctgacttccttgatccg
aatgaccacaccaggaccattgaaggctacccggccccggtgcgcgcggtgttaattgca
cgtaaaccatga
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