Phytobacter diazotrophicus: HHA33_19530
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Entry
HHA33_19530 CDS
T06586
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdz03009
]
HHA33_19530 (rimO)
Enzymes [BR:
pdz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HHA33_19530 (rimO)
Ribosome biogenesis [BR:
pdz03009
]
Prokaryotic type
ribosomal protein modification factors
HHA33_19530 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
TRAM
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QJF18606
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All DBs
Position
4094598..4095923
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AA seq
441 aa
AA seq
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MSNVTLQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYNDADMVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKVDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVLSEAKR
LVDAGVKELLVISQDTSAYGVDVKHRMGFHNGEPVKTSMVGLCEQLAKLGIWTRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVDGATANELADQVPEEIKEERW
NRFMQLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETKVKP
GDIIRVKVENADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtgaccctgcagccgaaaatcggctttgtttctctcggttgcccgaaaaac
ctcgttgactccgagcgcatcctcaccgaactgcgcaccgaaggctatgacgtggtaccg
agctacaacgacgccgatatggttatcgtcaacacctgcggctttatcgacagcgcggta
caagagtcgctggaagccattggcgaagcccttaatgaaaacggcaaagtgattgtcacc
ggctgtctgggcgccaaagtcgatcagattcgtgaagtccatccgaaagtgctggaaatc
accggtccgcatagctacgagcaggtgcttgagcatgtgcaccactatgtgccgaaaccg
aagcacaacccgttcctgagcctggtgccggaacagggcgtcaaactgacccctcgtcat
tacgcgtatctgaaaatttccgaaggctgcaaccatcgctgcaccttctgcattattccc
tcaatgcgtggcgatctggtaagccgtcctattggcgacgttttaagtgaagccaaacgt
ctggtggatgcgggtgtgaaagagctgctcgttatctcccaggacacctccgcctatggc
gtggacgtgaagcaccgtatgggcttccacaatggcgaaccggtaaaaaccagcatggtt
ggcctgtgcgaacaactggcaaaactgggtatctggacgcgtctgcactacgtctaccct
tacccgcacgttgatgatgtcattccgctaatggcagagggcaaaatcctgccgtatctg
gatattccgttgcagcacgccagcccgcgtatcctgaaactgatgaaacgtcctggctcc
gtggatcgtcaactggcgcgcatcaagcagtggcgcgaaatctgcccggaactgaccctg
cgctcgaccttcattgtcggcttccctggcgaaaccgaagaagatttccagatgctgctc
gatttcctcaaagaagcgcgtctggaccgcgttggctgcttcaaatacagcccggtagac
ggtgcgaccgccaacgaactggccgatcaggtgccggaagagatcaaagaagagcgctgg
aaccgctttatgcagctccagcagcagatttccgcagagcgtctgcaggaaaaagtgggc
cgcgaaattctggtcattatcgatgaagtcgatgaagaaggggcaattggccgcagcatg
gcggatgcaccggaaatcgacggcgcggtctatctgaacggggaaacgaaagtgaaaccg
ggcgatatcatccgcgtgaaagtcgaaaacgccgacgagtacgatctgtggggtagccgc
gtctaa
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