Phytobacter diazotrophicus: HHA33_20155
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Entry
HHA33_20155 CDS
T06586
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit SdhB
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz00020
Citrate cycle (TCA cycle)
pdz00190
Oxidative phosphorylation
pdz00650
Butanoate metabolism
pdz00720
Other carbon fixation pathways
pdz01100
Metabolic pathways
pdz01110
Biosynthesis of secondary metabolites
pdz01120
Microbial metabolism in diverse environments
pdz01200
Carbon metabolism
Module
pdz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pdz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pdz_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HHA33_20155 (sdhB)
00650 Butanoate metabolism
HHA33_20155 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
HHA33_20155 (sdhB)
00720 Other carbon fixation pathways
HHA33_20155 (sdhB)
Enzymes [BR:
pdz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HHA33_20155 (sdhB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_18
Fer4_9
Fer4
Motif
Other DBs
NCBI-ProteinID:
QJF18718
LinkDB
All DBs
Position
complement(4229250..4229966)
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AA seq
238 aa
AA seq
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MKFEFSIYRYNPDVDDAPRMQDYTLEGEEGRDMMLLDALMQLKEKDPSLSFRRSCREGVC
GSDGLNMNGKNGLACITPLSALGNGKQKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPY
LLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYR
FLIDSRDTETDNRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRSA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgagttttcaatttatcgctataacccggatgttgacgacgctccgcgcatg
caggattacaccctggaaggggaagaaggtcgtgacatgatgctgctcgatgcgttgatg
cagctaaaagaaaaagacccgagtctctctttccgtcgctcctgtcgcgaaggggtatgc
ggttcagacggcctcaacatgaacgggaaaaacggtctggcgtgtattacgccgctgtcg
gcgctgggcaacggtaagcagaagattgtgattcgcccactgccggggctgccggtaatc
cgtgatttggttgtggacatggggcaattctatgcccaatatgagaagattaagccttac
ttattgaataatgggcaaaatccacctgcgcgtgagcatctgcagatgcccgaacagcgt
gaaaaactcgatgggctgtacgaatgtatcctttgtgcatgctgctccacgtcctgtccg
tcgttctggtggaatccggataagtttatcggcccagccggtctgctggccgcgtatcgc
ttcctgattgacagtcgtgataccgagaccgataaccgcctggaagggctgagtgatgct
ttcagcgtattccgctgccatagcattatgaactgcgtcagtgtctgtccgaagggactg
aacccgacgcgcgccatcggtcatattaagtcgatgttgttgcaacgtagtgcgtaa
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