Phytobacter diazotrophicus: HHA33_22700
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Entry
HHA33_22700 CDS
T06586
Name
(GenBank) tetratricopeptide repeat protein
KO
K19360
nephrocystin-3
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pdz03037
]
HHA33_22700
Cilium and associated proteins [BR:
pdz03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
HHA33_22700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_NPHP3
TPR_7
TPR_1
TPR_2
TPR_8
TPR_MalT
TPR_19
TPR_14
DUF4062
TPR_16
RPN7
Chlorophyllase
TPR_Slam
NACHT
SPO22
TPR_9
Motif
Other DBs
NCBI-ProteinID:
QJF19194
LinkDB
All DBs
Position
complement(4776583..4780290)
Genome browser
AA seq
1235 aa
AA seq
DB search
MPTSASQPRQIRLFLSSTFRDMENERHELLTRVFPLFRQQCLERQVVFSEIDLRWGITEE
DAHNGQTVQICLEEIARCRALGISPFFIGFIGERYGWVPQRHELENYWHQAAQNENPYAR
RIEAALAEGISVTELEMRFGFMDDAQGVSRQRVQLYFRHPDLTASLAGKASATFYESTEA
ARGKLAALKRAIRETHAECIGVDGYQAISEFGQQILDFLTAELDTHFPLDEVPNERQLRL
HAQQCYALSRRENYVPLPAFKQQVETWAQDMLAAMLPNGDQARDPLNRLALVGDSGRGKS
AFMADLVASETFNTALVIAHFVGADGDNTPESWRERVLQVLTPYLPATLDVPTEDDARWA
AFAELVSAAQVQMGKPIILLLDAINQFSPQEAGMRRLNGLRFLPGTLLVVTSTEPLPDTW
QTLAFPELTEAHRREAITLFLRQYSKKLPETLVGQLVAAPACGNALFLRLVMEELRLHAD
HDSLAERVGALLTYDDAGQLFLALLNETDRDFRAEGYSLASHATTLIAASRAGVSHSDLA
VLLAPHLHQSGLKMADQTLLRLLARIAPFCLNEDGRLRITHTIFTQTLTALSPLMSPSRR
ALVARFNQPDAFSVAERTYQWMALENYEQLVETLGHVDAFCALQQSYPELASQAMLSLGA
GRSSLSLLLHALVENWNVWRPEVVFTPTMNAVSAWFLQRGFWQIGVRWSELAAVLVRKAT
PVNVINTMGTINSLALFYRLLGQYDKAEPLLHDALAMMRKMLPAGHPDIGVVLNNLAGIY
GALGQPEKAEPLLREALQAVSNENSIDFANLAQSLGECYQQLEEYEQAESLLRKSLAVRT
RLQARDNPHLIGLKRSLGGLYMELMRYDEAEPVLLEVLALRKAVLPPEHPDIATSLNDLG
ELYYRQGDADKAEPLFTQMMDIRRKSLSPGHPDFIAGLFYMAELYHSMGRLEDAASQLRE
AIPLLEHLPDNQAELLFARQSLANLYMEDDRHEKAIPLYEAMLTTQSELSRPESPVMLRL
LDDLGMLYLGQDRLDEAAASWTKWLAVQEGKLAPENAGRLKVMRNLACTYKAQQKYQEAK
ALLLQIMSLRVEHDHGDVELKVQSVAEAAEMHYFLAEYAAAETLYRTLFTMVDPQWLEAS
PEKNALFQWLVARGVLDKTGRKEQWGQTPVSMATPSWQTSLKVDVSTWSTAAQPGTPAEP
VSMTDESPAEPASAQTEAKRSVGEKLRSAWNKLVH
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgtcagccagtcagcctcgccagattcgcctgtttttgtcttccacctttcgg
gatatggaaaacgagcgtcatgaattactgacccgcgtttttcccctgtttcgacagcag
tgccttgaacgccaggtggtatttagcgagattgacctgcgctgggggattactgaagag
gatgcgcacaacggccagacggtgcaaatctgcctcgaagagatcgcccgctgccgtgcg
ctgggcatttcgccgttctttattggctttatcggcgaacgttacggttgggtaccacag
cgtcatgagctggaaaattactggcaccaggcggcgcagaatgaaaacccctatgcccga
cgtatcgaagcggcgctggcggaaggtatcagcgttaccgagctggagatgcgctttggg
tttatggacgatgcgcagggggtcagcaggcagcgggtccagctctattttcgccatccg
gatttaacggcttctcttgccgggaaagcgtcggccacgttctatgaaagcacagaagcg
gcccgcggcaagcttgcggccctgaaaagggcaatcagagagacgcacgcggagtgcatc
ggtgttgatggctaccaggcgatcagcgaatttggtcagcagatcctcgatttcttaact
gccgaactggatacccacttcccccttgatgaggtgccgaatgagcggcaactcaggtta
catgcgcaacaatgctatgcgctttcccggcgcgagaactatgtgccgttgcccgctttt
aaacagcaggtcgagacatgggcacaggacatgcttgctgccatgctcccgaatggagat
caggcgcgcgatcccctgaaccgtctggcgctggtcggcgattccgggcgggggaaaagt
gcgtttatggccgacctggtggcctctgaaaccttcaacacggcgttggtgatcgcccat
ttcgttggcgcggacggcgataacacgccggaaagctggcgtgagcgggtgctacaggtg
cttacgccttatctgcccgccacgcttgacgttcccaccgaggatgacgcgcgctgggcg
gcgtttgcggaactcgtgagcgccgcccaggtgcagatgggcaagcccatcattctgctg
ctggatgccattaaccagttctcccctcaggaggcggggatgcgccgcctcaatggcctg
cgcttcttaccgggcacattgctggtggtgacctcaacggaaccgctaccggacacgtgg
cagacgctggctttcccggaactgaccgaagcgcatcgccgcgaggccataacgttattt
ttgcgccagtacagtaaaaagctgccggagacgttagtcgggcaactggttgccgcgccc
gcctgcggtaacgcgctgtttttgcgtctggtgatggaagagttacgcctgcatgcggat
cacgactccctggcggaacgggtgggcgcattactcacttatgatgatgcggggcaactg
ttcctggcgctgttaaatgaaaccgaccgggattttcgcgctgagggatactcccttgcc
agccatgcgacgacgctgattgccgcttcccgcgcgggggtatcccacagtgatttagcc
gtcctgctggcaccgcatctgcaccagtcaggcctgaaaatggccgaccagaccttgctg
cgcttgctggcgcgtatcgcgccgttttgcctgaacgaagacggcaggttgcgtatcacc
cataccatctttacccaaacgctgaccgcgctgtcgccgttgatgtccccgtcccggcgg
gcgctggtggcccggtttaatcaaccggatgcgttttcggtggccgaacgcacataccag
tggatggcgctggaaaattatgagcaactggtggaaaccctcgggcatgtcgacgccttt
tgcgcgttacagcaaagttacccggagctggcctcgcaggcgatgctctcacttggcgcc
gggcgaagctccctttcgctgttattacatgcgctggtggaaaactggaatgtctggcgc
cctgaggtggtgtttacgcccacaatgaacgcggtaagcgcctggtttttgcaacgcgga
ttctggcagattggtgtgcgctggagtgaactggcggctgttctggtacgcaaagccacg
cccgttaacgtgatcaacaccatggggacgatcaatagcctggcgcttttctatcgcctg
cttgggcagtatgacaaagcggaaccgctgctgcatgatgcgctggcaatgatgcgcaag
atgttgcccgcagggcacccggatattggcgtcgtgctgaataacctggccggaatttac
ggcgcgctgggccagccggaaaaagcagagccgctattgcgcgaagcactgcaggcggtg
agcaacgaaaacagtatcgattttgccaacctcgcccagagtctgggggaatgttatcag
caactggaagaatatgagcaggcggagtctttactgcgtaaatcgctggcggtgagaacg
cgtctgcaggcccgcgacaatccccatctcattggcttaaagcgcagccttggcgggctc
tatatggagcttatgcgttacgacgaagccgaacctgttttgcttgaagtgctggcctta
cgtaaggcggttttgccgccggaacatcccgatatcgccacaagtctgaacgatttggga
gaactctattatcgtcagggcgacgccgataaagccgaaccgctgtttacgcagatgatg
gacatccggcgtaaatcgttatcaccgggccatcctgacttcattgccgggctgttctat
atggcggagttataccattccatggggcgccttgaagacgccgcatcgcaactgcgcgaa
gccatccctttgcttgagcatctgccggataatcaggcggagctgctatttgcccgacaa
tcgctggcaaacctctatatggaagacgatcgccatgaaaaggcgatcccgctgtatgaa
gcgatgctgaccacgcagtctgaactgagtcggcctgaaagcccggtgatgttacggtta
cttgatgacctcggcatgctctacctgggccaggatcgtctggatgaggcggccgcctct
tggacgaaatggctcgctgtacaggagggtaagctcgcgccggagaatgcaggcaggctc
aaggttatgcgtaatctggcctgtacttacaaagcacagcagaaatatcaggaagcgaaa
gcattgctgctgcaaattatgtcgcttcgtgttgagcatgaccatggtgacgttgagctt
aaggtgcagtccgtggcggaggcagcagaaatgcattattttctggccgagtatgcggct
gcggaaaccttgtaccgcacgctctttaccatggtggatccgcagtggcttgaagcatcc
ccggaaaaaaacgcgctgtttcaatggctggtggcaagaggcgtgctggacaaaacgggg
cgcaaggaacaatgggggcagacgcctgtcagtatggcgaccccgtcatggcagacatcc
ctaaaagtcgacgtctcaacatggtcaacagcggcacaacctggaacgccagcggagccg
gtatccatgacagatgaatctccggcggaacctgcgagcgcgcaaacagaggcaaagcgt
agcgtgggtgaaaagctacgcagtgcctggaataagctcgttcactaa
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