Phytobacter diazotrophicus: HHA33_23835
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Entry
HHA33_23835 CDS
T06586
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz00300
Lysine biosynthesis
pdz00550
Peptidoglycan biosynthesis
pdz01100
Metabolic pathways
pdz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HHA33_23835 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HHA33_23835 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HHA33_23835 (murF)
Enzymes [BR:
pdz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
HHA33_23835 (murF)
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
BBMV_Gp1_N
Motif
Other DBs
NCBI-ProteinID:
QJF19388
LinkDB
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Position
complement(5030760..5032118)
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AA seq
452 aa
AA seq
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MISVTLSQLSGILHGELHGADATIEAVTTDTRKLTSGCLFVALKGERFDAHDFADKAKEG
GAGALLVSRKLNIDLPQLVVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAA
ILSECGNTLYTAGNLNNDIGVPMTLLRLTNEHQYAVIELGANHQGEIAWTVSLTRPEAAL
VNNLAAAHLEGFGSLAGVAKAKGEIYTGLPANGIAIMNADNNDWLNWQNIIGDRKVWRFS
PNAANSDFTATNIHVTSHGTEFTLQTPTGGIDVTLPLPGRHNIANALAATALAMAVGAPH
DAVKKGLANLKAVPGRLFPVQLGENQLLLDDSYNANVGSMTAAAHVLAEMPGYRVMVVGD
MAELGDESEACHIQVGETAKAVGIDHVLSVGKLSKAISDASGVGEHFDDKAAMIARLEAL
IAEKQIITILVKGSRSAAMEEVARALQEKRAC
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgattagcgtaacgcttagccagctcagcggcattttgcatggcgaactgcatggtgca
gacgcaaccattgaggcggtcactacggacacccgcaagctgacctctggttgcctgttt
gtggcgctgaaaggcgaacgtttcgatgcccacgatttcgctgataaagcaaaagagggc
ggtgctggcgcgctgttagtcagtcgcaaactgaatatcgacctgccgcaactggtggtg
aaggatacccgtctcgcctttggcgaactggcagcctgggttcgccagcaggttcctgct
cgcgttgtggcgctgaccggctcgtctggcaaaacctcggtgaaagagatgacggccgcc
atcctcagcgaatgtggcaatacgctctataccgccgggaacctgaacaatgacatcggt
gtgccgatgaccctgctgcgcctgacaaatgaacatcagtatgcagtgattgaacttggc
gctaatcaccagggtgaaatcgcctggactgtgtcgctgacccgcccggaagcggcgctg
gttaacaatcttgcggcagcgcatcttgaagggtttggctctctggccggggtggcaaag
gctaaaggcgagatttataccggcctgcctgccaacggcatcgccattatgaatgccgat
aacaatgactggctgaactggcaaaacatcattggcgatcgcaaagtctggcgtttctcg
ccaaatgccgccaacagcgattttaccgcgaccaatattcatgtgacctcccacggtact
gaatttacgctgcaaaccccaacgggcggtattgatgtcacgttgccattacccgggcgc
cacaatatcgcgaatgcgctggccgcaaccgcgctggcgatggcggtaggggcaccgcat
gacgcagtgaaaaaaggtctggctaatctgaaagctgttccggggcgtcttttcccggtg
caacttggagaaaaccaattactgctggacgacagctacaacgcgaacgtggggtcgatg
acggcggcagcgcatgtgttagctgaaatgccaggctatcgggtcatggtggtcggcgac
atggcggaattgggtgatgaaagcgaggcgtgtcacattcaggtgggtgaaacggcaaaa
gctgttggtatcgaccatgtgttaagcgtcggcaagctcagtaaagccatcagtgatgcc
agtggcgttggcgagcattttgatgataaggcggcaatgattgcgcgtttagaggcgctg
attgccgagaagcaaattattaccattttggtgaaaggttcacgtagtgccgccatggaa
gaggtcgcacgcgcattacaggagaaaagggcatgttag
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