Phytobacter diazotrophicus: HHA33_24130
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Entry
HHA33_24130 CDS
T06586
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz00220
Arginine biosynthesis
pdz00240
Pyrimidine metabolism
pdz00250
Alanine, aspartate and glutamate metabolism
pdz01100
Metabolic pathways
pdz01110
Biosynthesis of secondary metabolites
pdz01240
Biosynthesis of cofactors
Module
pdz_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HHA33_24130 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HHA33_24130 (carB)
00220 Arginine biosynthesis
HHA33_24130 (carB)
Enzymes [BR:
pdz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HHA33_24130 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
Radical_SAM
ATP-grasp_5
BamE
Motif
Other DBs
NCBI-ProteinID:
QJF19443
LinkDB
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Position
complement(5100293..5103517)
Genome browser
AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLETARSGIAHNMEEALAVAADVGYPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVG
INGLDADFLRMLKRKGFADARLAKLAGVRETEVRKLRDQYNLHPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVP
VIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAVEKAKEIGYPLVVRPSYVL
GGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGEMVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQDIQDVMRQQVQKLAFELQVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMVGQTLAQQGVTKEIIPPYYSVKEVVLPFNKF
PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKQGRALLSVREGDKERVVDL
AAKLLKFGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGR
RAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVTSVQEMHAQIKA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaaaagcatcctgatccttggcgccggcccgattgttatc
ggtcaggcgtgtgagttcgactactccggtgcgcaggcgtgtaaagcgctgcgtgaagag
ggttatcgcgtcattctggtgaactccaacccggcgacgatcatgaccgacccggaaatg
gcggatgcaacctatatcgagccgatccactgggaagtggtacgcaaaatcatcgaaaaa
gagcgtccggatgcggtactgccgaccatggggggccagacagcgctgaactgtgcgctg
gagctggaacgccagggcgtactggccgagttcggcgtcactatgatcggtgctaccgct
gacgcgattgataaagcagaagaccgccgccgtttcgacgtggcgatgaagaaaatcggc
ctggaaaccgcgcgttccggtatcgcgcacaatatggaagaggcgctcgccgttgccgct
gacgtgggctatccgtgcatcattcgacccagcttcaccatgggcggaacgggcggcggt
atcgcctacaaccgcgaagagtttgaagagatttgtgaacgcggtctggacctttccccg
acaaaagagctgctgattgatgagtcgctgattggctggaaagagtacgagatggaggtg
gtgcgtgataaaaacgacaactgtatcatcgtctgctccatcgaaaacttcgacgccatg
ggcatccacaccggtgactccatcaccgttgcgcctgcacagaccctgaccgataaagag
tatcaaatcatgcgtaacgcctcgatggcggtattgcgtgaaatcggcgtggaaaccggc
ggttctaacgtccagttctcggttaacccgaaaaatggccgtctgattgttatcgaaatg
aacccgcgtgtctcccgctcctctgcgctggcctcgaaagcgaccggcttcccgattgcc
aaagtggcggcgaaactggcggtgggttacaccctcgacgaattgatgaacgatatcacc
ggtggccgtacccctgcgtccttcgaaccgtctatcgactacgttgtcaccaagatcccg
cgcttcaactttgagaaattcgctggcgccaatgaccgcctgaccactcagatgaaatcg
gtcggtgaagtgatggcgattggccgcacgcagcaggaatccctgcaaaaagcgctgcgc
ggcctggaagtcggcgccaccggctttgacccgaaagtgagcctggatgacccggaagcg
ctgaccaaaatccgtcgcgagctgaaagacgctggcgctgagcgtatctggtacatcgcc
gatgccttccgtgcaggcctgtccgttgatggcgttttcaacctgaccaatattgaccgc
tggttcctggtgcagattgaagaactggtgcgtctggaagagaaagtcgccgaagtgggt
attaacggcctcgacgcggatttcctgcgtatgctcaagcgtaaaggctttgccgatgcg
cgtctggctaaactggcaggcgtgcgcgaaacggaagtgcgtaagctgcgcgatcagtac
aacctgcacccggtctacaaacgtgtggacacctgtgcggcagaattcgcgaccgacacc
gcttacatgtactccacgtatgaagaagagtgtgaagcgaatccgaaccaggaccgcgat
aaaatcatggtactgggtggcggcccgaaccgtatcggtcaggggatcgaatttgactac
tgctgcgtacacgcctcgctggcgctgcgcgaagacggctacgagaccatcatggtcaac
tgtaacccggaaaccgtctccaccgactatgacacctccgaccgtctctacttcgagccg
gtaacgctggaagatgtgctggaaatcgtgcgtatcgagaagccgaaaggcgttatcgtg
cagtacggcggccagacgccgctgaaactggcgcgcgcgctggaagcggcgggtgtaccg
gttatcggtaccagcccggatgccattgaccgtgccgaagaccgtgaacgtttccagcag
gcggttgaccgtctgaaactgaaacaaccggcgaacgccaccgtcaccgccattgagcaa
gcggttgagaaggcgaaagagattggttacccgctggtggtgcgtccgtcttatgtactg
ggcggccgtgcgatggaaatcgtctacgacgaagccgacctgcgtcgctacttccagacc
gcagtgagcgtgtccaatgatgcgccagtcctgctggatcgcttcctggacgatgcggta
gaagtggatgttgacgctatctgtgacggcgaaatggtgctgattggcggcatcatggag
catatcgagcaggccggcgtgcactccggcgactccgcctgttccctgccagcctacacg
ctgagccaggacatccaggacgtgatgcgccagcaggtgcagaaactggccttcgaactg
caggttcgcggtctgatgaacgtccagtttgcggtaaaagataacgaagtgtatctgatt
gaggtgaacccgcgtgcggcgcgtaccgtaccgtttgtctccaaagccaccggcgtaccg
ctggcgaaagtggcggcgcgtgtgatggtcggtcagacgctggcacagcagggcgtcacc
aaagaaattatcccgccgtactactcagtgaaagaagtggtgctgccattcaataaattc
ccgggcgttgacccgctgttagggccagaaatgcgctctaccggggaagtgatgggtgtg
ggccgtaccttcgccgaagcgtttgctaaagcgcaactgggtagcaactccacgatgaag
aaacagggtcgtgcgctgctttctgtacgtgaaggggataaagagcgtgtggttgacctg
gcagcgaagctgctcaagttcggtttcgagctggatgcaacccacggtacggcgattgtc
ctgggtgaagccggtattaatccgcgtctggtgaacaaggtgcatgaaggtcgtccgcac
attcaggaccgtattaagaatggcgaatacacctacatcatcaacaccaccgcaggccgt
cgggcgatagaagactccagggtcattcgccgcagcgcgctgcagtacaaagtgcattac
gacaccacgctgaacggtggttttgctaccgcgatggcgctgaacgccgatgccaccgag
aaggtgacctccgttcaggaaatgcacgcgcagattaaagcgtaa
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