KEGG   Phytobacter diazotrophicus: HHA33_24980
Entry
HHA33_24980       CDS       T06586                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pdz  Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:pdz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pdz02048]
    HHA33_24980
Enzymes [BR:pdz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HHA33_24980
Prokaryotic defense system [BR:pdz02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HHA33_24980
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD DUF4145 HSDR_N Helicase_C HSDR_N_2 TetR_C_9 NAD_binding_9 Mis12
Other DBs
NCBI-ProteinID: QJF19591
LinkDB
Position
5276816..5280244
AA seq 1142 aa
MEQSRNFEMLRSKWPDLASLATAAEQYVHSDPESCLVKLRNYDEQIVRWIYRQERLPEGF
KASLYDLMNASVFTSIMPEAIVMKMDALRIHGNRAAHGSTIKAQDAYWLLKEAFLLGLWL
YVRYAQGNVDDCQPFALPPLSDALNTSVNLTEQQKRLDTAIKDLDSAREREIALQRALQK
EQEKTEILEQRLHEVKDRNQQVADILSLDEAETRRHLIDSRLIAAGWDVAPDAANTEQVS
QEHPVKEQPTISGNGFADYVLWDDSHKPIAVVEAKKTKVSPDKGRTQARLYADWLEKEYG
QRPVIFYTNGYDIYLWDDHKTQSYPPRKVFGFYSKESLQYLIQQRETRLPLNEVPHARDS
KGELVAGRLYQQETLARVSERFTQKYRQSLIVQATGTGKTRVAIALSKLMIDARWVKRVL
FLCDRRELRKQAGNAFKQYISDPMYVVGVSPKKDMLNARVYIATYPGMMNIMDRFDVGYF
DLIIADESHRSIYNVYGDLFKYFDALQVGLTATPIDMVSKTTFGLFGCEGRIPTANYSLE
DAIADNNLVPYEVVTHTTQFLREGIRRDNLSNAQIRELEEQNIDPNTLEFDSKAIDDRIF
NRDTNRLILRNLMENGIKDKDGQLPGKSIIFARGHDHAILLRDLFDEMYPQFAGRFCQVI
DNQETRSEQLIEDFKGLDESTNKELIIAISVDMLDTGIDVPEIVNLVFAKPVKSKVKFWQ
MIGRGTRLAKGLYGVDENGKSLDKEKFRIFDHWGNFEYHELNTEEAEVTASKPLAQKRFE
AWIELGRAALRKFDKQAVNRVAAQLLVQINTLDDKSIAVQERWQQKAQCSDERLLQQFAP
QTQQVLIDFIAPLMQWVDVRGQSDAMRFDMDMLAAQTARYTNIEELDVLWPTVVEKLERL
PPHLVQVQQQGARINNLRELSWWKQASFNDFEDMRIHLRGIMHLMEKEVIPQVGTLTVDV
TEDVTQIETGIRKTQVRTIDFRLWRQQVQGALEPLFKQNTVLKKIRHGEPVTPEELDELA
KLVLIQNPNVDIRDLKSFFPQATASLDKLLRTIIGMDGQAVTERFAMFASENHLNSQQIR
FLEMLKNHIRDYGTIEMKQLFEQPFTQIHGEGVTGIFPDMQQIVTLQKIVEELGVVIPLP
AL
NT seq 3429 nt   +upstreamnt  +downstreamnt
atggagcagtctcgcaattttgaaatgctacgtagtaagtggcctgatttagcaagcctt
gcgaccgcagcagaacagtacgtccattcggatccagaaagttgcttagttaagctacgt
aactatgatgagcaaattgtccgctggatctaccgacaggaacgacttcctgaaggcttc
aaagctagcctgtatgatctgatgaatgcttctgtatttactagcatcatgcctgaagca
attgtaatgaaaatggacgccctgcgcattcatggcaatcgcgcagctcatggcagcacc
attaaagctcaggatgcatactggttgttaaaagaagcatttctattagggctatggctt
tacgttcgttacgctcagggaaatgttgatgactgccaaccttttgctctaccgccattg
tctgatgctctaaatacttcagttaatcttacagaacagcaaaaacgtttagatacggcg
atcaaagatcttgatagtgctcgcgagcgggaaattgcgcttcagcgcgcattgcaaaaa
gagcaggaaaaaacagaaatacttgaacaacgcctgcatgaagtaaaagatcgtaaccag
caagttgctgacattctctcactggatgaagctgaaactcgccgccatctgattgactcg
cgcctcattgctgcaggctgggatgtagctcccgacgctgctaatactgagcaggtgtct
caggagcatcctgttaaagaacaaccaacgatatcaggcaacggatttgcagattatgta
ctgtgggatgatagccacaaaccgattgccgtagttgaagccaaaaaaactaaagtcagt
ccagataaaggtcggacacaagccagactatatgctgattggctggaaaaagaatacggc
caacgtcctgttattttttacaccaatggttacgatatttatctgtgggatgaccataaa
actcagagctacccgccacgcaaagtattcggtttctacagtaaagaaagcctgcaatat
ctgattcaacaacgcgagacccgcttaccactgaatgaagttcctcacgccagagacagt
aaaggtgagcttgtcgctggccgcttgtatcaacaagagaccctagcgagggtgagtgaa
cgttttacacagaaatatcgtcagtcgctcattgtacaagctactggcacgggaaaaact
cgagttgctatcgccttaagcaaactaatgattgatgcccgctgggtaaagcgagtgttg
ttcctttgtgatcgtagagaactacgtaagcaggcagggaacgcgtttaaacaatacatc
agtgaccctatgtatgtcgttggcgtatctccaaagaaagatatgcttaatgcccgtgtc
tatatagcgacctatccagggatgatgaacatcatggatcgctttgatgttggttatttc
gatctcattattgctgatgaatcacaccgttccatctataacgtatacggtgatttgttc
aaatattttgatgcgttacaggtaggtctgacagcgacccccattgatatggtcagcaaa
actactttcgggctgtttggctgtgaagggcgcattcctacggccaactacagcctggaa
gatgcaattgcagacaacaatctggtgccatatgaagttgtcactcacactacacagttt
ttacgtgagggaatcaggcgcgataacttaagcaatgctcagatacgtgaactagaagaa
cagaatattgatcccaatacactggagtttgatagcaaagccatcgatgatcggatcttt
aaccgagacactaaccgactaattttacgtaatctgatggaaaatggcatcaaagataaa
gacggccagcttcccggcaaatcaattatattcgccagagggcacgaccatgccatcttg
ttgagagatctatttgatgaaatgtacccgcagtttgctggccgcttttgtcaggttatt
gataatcaggaaaccagatcggagcagctgatcgaagattttaaagggttggatgaaagt
accaacaaagagcttatcatcgcaatttcggttgatatgttggataccggcatcgatgta
ccagaaatagtcaacttggtttttgcaaaacccgttaaatcgaaagtgaagttctggcaa
atgattggccgtggaacacgtttagctaaaggtctgtatggcgttgatgagaatggaaaa
tcgctggataaagagaaattccgcatctttgatcactggggtaacttcgagtatcacgaa
ctaaataccgaggaagccgaggttacagcaagtaagcccttagcacagaaacgttttgag
gcatggattgagctaggtcgggcagcattacgaaagtttgataaacaagcagttaataga
gtagccgcacaactactggtacaaattaatactctggatgataaatccatagcagtgcaa
gaaagatggcagcaaaaagcacaatgtagcgatgaaaggctcttgcaacaatttgcccca
cagacccaacaggtattaatcgattttattgctccactaatgcaatgggtagatgtacgc
ggccaaagcgacgcaatgcgtttcgatatggatatgctagctgcacaaacagcccgttac
accaacatagaagaacttgatgtactctggcctaccgtagttgaaaagctagaaaggctt
ccccctcatttagtgcaggtacagcaacaaggggctcgcataaacaatttgcgagaactt
tcttggtggaaacaagctagttttaatgatttcgaagatatgcgtatccatttgcgtggc
atcatgcatctgatggaaaaagaagtcatacctcaagttggaacgctcacggtagatgtt
actgaggatgtaactcagatagaaaccggtatcaggaaaacacaagttcgaactatagat
ttcagactttggcgtcaacaggttcaaggggcactggaaccattattcaagcaaaatacc
gtgctcaagaaaattcgccatggtgaaccagtgacacctgaagaactagacgaattggca
aaacttgtactaattcaaaaccctaacgtcgatattcgcgatctgaaaagcttctttcct
caagcaactgccagtttggataaactgttgcgaacgattatcggtatggatgggcaagct
gttaccgaacgctttgctatgtttgcatctgaaaatcaccttaacagccagcagattcgt
ttcctggagatgctcaaaaatcatatccgtgattacggtactatagagatgaaacagctc
ttcgaacagccatttacccagatacatggtgagggtgtcaccggaatcttcccggatatg
cagcagatcgtaacattgcaaaaaatcgtagaagagttgggtgtagtcattccgttaccg
gcgctataa

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