Phytobacter diazotrophicus: HHA33_25170
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Entry
HHA33_25170 CDS
T06586
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz00230
Purine metabolism
pdz00240
Pyrimidine metabolism
pdz01100
Metabolic pathways
pdz01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
HHA33_25170 (nrdD)
00240 Pyrimidine metabolism
HHA33_25170 (nrdD)
Enzymes [BR:
pdz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
HHA33_25170 (nrdD)
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GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
PSV_ORF131-like_dom
Zn_Tnp_IS91
Anti-TRAP
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-ProteinID:
QJF19625
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All DBs
Position
5323832..5325967
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AA seq
711 aa
AA seq
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MTPHVMKRDGKKVPFKSERIKEAILRAAKAAGVDDADYCATVAEIVSQQMQNRSQVDINE
IQTAVENQLMSGSHKQLARAYIEYRHDRDIAREKRGRLNQEIRGLVEQTNSALLNENANK
DSKVIPTQRDLLAGIVAKHYARQHLLPRDVVLAHERGEIHYHDLDYSPFFPMFNCMLIDL
KGMLTHGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASF
AKHRKVADEWQIPDADGYAHSRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WESRLIQQSILRNRIAGLGKNRKTAVFPKLVFAIKDGLNHKFDDPNYDIKQLALECASKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGVYEENGEQIHDGRNNLGVISLNLPRIALEAK
GNEAAFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLKADDDVSEIFK
NGRASISLGFIGIHETINALFGKEHMFDSETLRAKGVAIVERLRQAVDQWKEETGYGFSL
YSTPSENLCDRFCRLDTAEFGVVDGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLA
SGGFICYGEYPNIQHNLRALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFT
CPKCGNHDAARVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgcatgtgatgaaacgagacggtaagaaagtgccgttcaaatcagagcgcatc
aaagaagccattctgcgtgcagctaaagcagcgggagtcgatgacgcggactattgcgcc
accgtcgcagaaattgtcagtcagcagatgcaaaaccgttcacaggtcgacatcaacgaa
atccagaccgctgtcgaaaaccagctcatgtccggttcccacaagcagctcgcgcgtgcc
tatattgaatatcgccacgatcgtgatatcgcgcgtgaaaaacggggccgcctgaaccag
gaaattcgcgggctggtggaacagactaactccgcactgctgaacgaaaacgcaaacaaa
gacagtaaagtcattccgacccagcgcgacctgctggccggtatcgttgccaaacactat
gcccgtcagcacctgttgccgcgcgatgtggtactggcgcatgagcgtggtgaaatccat
tatcacgatctcgactattcgccgttcttcccgatgttcaactgcatgctgatcgacctg
aaaggcatgctgacccacggctttaaaatgggcaacgcggaaattgagccgccgaaatcc
atctctaccgcaaccgcagtgaccgcgcaaattatcgcgcaggtcgccagccacatttac
ggcggtaccaccatcaaccgtatcgacgaagtgctggcgccgtttgtcaccgcaagcttt
gccaaacaccgtaaagtcgccgacgaatggcaaattccggatgccgacggctacgcacac
agccgcacggaaaaagagtgttacgacgccttccagtcactggaatatgaagtcaatacg
ctgcacaccgccaatggccagaccccgttcgtcaccttcggctttggtcttggcaccagt
tgggaatcgcgtctgattcagcagtcgattctgcgtaaccgcatcgcgggtcttggtaaa
aaccgtaaaaccgccgtgttcccgaagctggtgttcgccattaaagatggcctgaaccat
aagtttgatgacccgaactacgacatcaaacaactggcgctggagtgcgcaagcaaacgc
atgtacccggatatcctcaactacgatcaggtcgtgaaagtgaccggctcgtttaaaacc
ccgatgggctgccgcagctttctcggcgtgtacgaagagaacggcgaacagattcacgac
gggcgtaacaatctgggcgtcatcagcctgaacctgccacgcatcgcgctggaagccaaa
ggcaacgaagccgcgttctggaaactgctggatgaacgtctggtgctggcgcgtaaggcg
ctgatgacccgtatcgcccgtctggaaggggtgaaagcgcgtgtggcaccgatcctctat
atggaaggggcctgcggcgtgcgtctgaaagcggacgacgacgtctctgagattttcaaa
aacggccgtgcgtctatctcgcttggctttatcggcatccacgaaaccattaacgcgctg
ttcggcaaagagcatatgttcgacagtgaaacgctgcgtgccaaaggcgttgcgattgta
gagcgtctgcgccaggcggtggatcaatggaaagaggagaccggctacggttttagcctc
tacagcaccccgagtgaaaacctgtgtgaccgtttctgccgtctggataccgctgagttt
ggcgtggtggatggggtgacggataaaggttattacaccaacagcttccatctcgatgtc
gagaagaaggtaaacccgtacgacaagattgatttcgaagcaccatatccaccgctcgcc
agcggggggttcatttgctacggcgagtacccgaacattcagcacaacctgcgtgcgctg
gaagatgtctgggattacagctatcagcatgtaccctattacgggaccaatacgccgatt
gatgagtgctacgagtgtggttttaccggcgagttcgagtgtaccagcaaaggcttcacc
tgcccgaaatgcggcaaccacgatgcagcacgagtatcggtgacccgccgcgtgtgcggc
tatctgggtagtccggacgcccgtccgtttaacgccgggaagcaggaagaagtgaaacgc
cgggttaagcatctggggaatgggcagataggttaa
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