Pseudoalteromonas espejiana: PESP_a0542
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Entry
PESP_a0542 CDS
T04989
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pea
Pseudoalteromonas espejiana
Pathway
pea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PESP_a0542 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_a0542 (mutM)
Enzymes [BR:
pea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PESP_a0542 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PESP_a0542 (mutM)
DNA repair and recombination proteins [BR:
pea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PESP_a0542 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ASM48779
LinkDB
All DBs
Position
I:552234..553043
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AA seq
269 aa
AA seq
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MPELPEVEVSRMGITPHIENQVVSKVNIYNASMRWPVPDDVYQLEGLTVTSIERRAKYLL
LHCELGSTLLHLGMSGNLRVVDKSEPLKKHDHVEFVFGNNKALRLNDPRRFGCCLWQAPG
EVHKLLSKLGPEPLTDDFFAKRVYEQSRNKKVPVKQFIMDNAVVVGVGNIYANESLFKAG
IHPKREAGKVSLKRYQTLIPIIKDTLAAAITQGGTTLKDFAQSDGKPGYFAQQLLVYGRK
GEECVTCKTPLEEIRLGQRSTVFCKQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggtagaagtaagccgtatggggatcacgcctcatattgaaaac
caagtcgtaagcaaagttaatatttataatgccagtatgcgctggccagttcctgatgat
gtataccaacttgaaggcttaaccgttactagtattgaacgccgtgccaagtaccttctt
ttacattgtgagttaggcagtacactattgcatttaggtatgtcgggtaatttgcgggtt
gttgataaaagcgagcctttaaaaaagcatgaccatgtagaatttgtatttggtaataat
aaggcgctgcgtttaaacgaccctcgacgctttgggtgctgtttatggcaagcacctggt
gaagtgcacaagttactttcaaagctgggtcctgagccgctaaccgacgatttttttgca
aaacgtgtgtacgagcagtcacgcaataaaaaggtaccggtaaaacagtttattatggat
aacgcagtggttgttggcgttggtaatatttacgccaacgagtcgttatttaaagcgggg
attcacccaaagcgtgaagctggaaaagtatcgctcaagcgttaccaaactcttattcca
ataattaaagacacactagcagctgctattacacaaggtggtacaaccttaaaagatttt
gcacaaagtgatggcaagccagggtattttgcacagcaacttttagtttatggccgtaaa
ggtgaagagtgtgtaacgtgtaaaacgccgcttgaggaaattaggctggggcagcgaagt
actgttttttgtaaacagtgccaaaagtaa
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