Pseudoalteromonas espejiana: PESP_a0667
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Entry
PESP_a0667 CDS
T04989
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pea
Pseudoalteromonas espejiana
Pathway
pea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PESP_a0667 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pea03019
]
PESP_a0667 (recQ)
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_a0667 (recQ)
Enzymes [BR:
pea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PESP_a0667 (recQ)
Messenger RNA biogenesis [BR:
pea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PESP_a0667 (recQ)
DNA repair and recombination proteins [BR:
pea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PESP_a0667 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
HEM4
Motif
Other DBs
NCBI-ProteinID:
ASM48892
LinkDB
All DBs
Position
I:complement(666318..668141)
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AA seq
607 aa
AA seq
DB search
MNTLTPTPSTLVRKPETVLKQVFGYSEFRDGQKAVIDAAINGQDSLVLLPTGGGKSVCYQ
VPALVLEGVTVVISPLISLMQDQVTQLQALGVKAAYVNNSLAREEQQLVYQQLHQGLIKL
LYVAPEKVLQRDFLERLSHLNVSLFAIDEAHCVSHWGHDFRPHYFRLNELKQRFSHVPMM
ALTATADKATRFDIVEQLKLQHPYIHTGSFDRPNIRYTLEEKFKPMAQLLRYLKEQKNQS
GIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGM
GINKPNVRFVLHYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDE
QRRRVEEQRFNAMASFAEAQTCRRQILLNYFSEYKREQCGNCDICINPPKSFDGTLVAQQ
ALSCVYRAGQRFGLGYIVELLRGANTSRIRDNNHHELSTYGIGKDKSSEFWLSILRQLIH
QGLLSQDITQGASLRLTEAARAVLKSEYALQMAEPRLQAKHVYQDKLAQFNYDKKLFARL
RALRKELADADDVPPYVVFNDKTLAEMAQLIPTNDSEFLKVSGVGFTKLNKYGGEFLTAI
RNYLATN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattaacgcctacacctagcacgctcgtgcgtaaacccgaaactgtcctcaaa
caagtgtttggttacagtgagtttcgtgatggccaaaaagcagtgatcgacgcagctata
aacggccaagactccttagtactactgccaacaggcggtggtaaatcagtgtgctaccaa
gttccggctttagtacttgaaggcgttaccgtggttatttctccgcttatatcgcttatg
caagaccaagtaacacagctgcaggcactgggtgtaaaagcagcttacgttaataatagc
ctagcgcgagaagaacagcagttagtgtatcaacagctccatcagggattaattaaacta
ttatatgtagcccctgaaaaagtattgcaacgtgactttttagagcgtttatcgcaccta
aatgtaagcctctttgccatagacgaagcgcactgtgtatcccattggggccacgatttt
agaccccattactttagattaaacgagcttaaacaacgtttttctcatgtacctatgatg
gcacttactgccacagccgataaagccactcgctttgatatagttgaacaattaaaacta
caacacccctatatccataccggcagtttcgacagacctaatattcgttacacactagaa
gaaaaattcaaacctatggcgcaactactgcgctatttaaaagagcaaaaaaatcaaagc
ggtattatttactgcaccagccgtaaacgtgtagacgacattgccgaaaaactggcagat
gcagggcttaatgcagctgcttaccatgcaggtatgagtaacgagcagcgccaatttgta
caaacgggatttgcccgcgacgacatacagatagtggttgcaaccgtggcctttggtatg
ggaataaataaaccgaatgtgcgctttgtattgcattacgatattccaaaaagtatagaa
gcctactatcaagaaaccgggcgtgctggtcgtgatggactcgccgccgaagccataatg
tattttgaccctgccgatattggccgcgttaggcgcttttttgaagatatagacgatgaa
cagcgccgccgcgtagaagagcagcgctttaacgctatggcaagttttgccgaagcacaa
acctgcagacgtcaaattctccttaattactttagtgagtacaaacgcgagcaatgtggt
aactgcgatatttgcataaatccgccaaaaagctttgatggcacattagtagcgcaacag
gcgctttcgtgtgtttaccgggctgggcagcgttttggcttaggttatattgttgagtta
ttacgcggcgcaaataccagtcgcatacgcgacaacaaccatcacgaattaagtacatac
ggcataggtaaagataaaagcagtgagttttggcttagtattttgcgccaacttattcat
cagggtttactaagccaagatataacgcaaggtgcatcacttcgcttaaccgaagcagcc
cgcgccgtacttaaaagtgaatacgcactgcaaatggctgaacctcgcttacaagctaaa
cacgtttaccaagacaaacttgcccagtttaattacgataaaaaactatttgcccgccta
cgcgccttacgtaaagaactcgctgatgccgatgacgtaccgccttatgttgtatttaac
gataaaacgttagccgaaatggcgcagttaatccctacaaacgacagcgagtttttaaaa
gtgtcgggagtgggctttaccaaattaaataaatatggcggcgaatttttaactgcaatt
cgcaattacttagcgaccaattaa
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