Pseudoalteromonas espejiana: PESP_a1108
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Entry
PESP_a1108 CDS
T04989
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pea
Pseudoalteromonas espejiana
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pea03400
]
PESP_a1108 (phrB)
Enzymes [BR:
pea01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PESP_a1108 (phrB)
DNA repair and recombination proteins [BR:
pea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PESP_a1108 (phrB)
Prokaryotic type
PESP_a1108 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASM49265
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All DBs
Position
I:complement(1071426..1072940)
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AA seq
504 aa
AA seq
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MREKINIVWFKRDLRLSDHLPLKHAFNSDIPTLLIYNFEPLMLEDAHYNERHWRFVYQSI
TQINSQLERFNATLYIFSQDMLTLLNALNKTYQIINLYSHQEIGLNNTFERDKAVTTWCK
EQQVHWQESKTGAVIRGKKNRSNWNERWQKTMQAPVAIPNWKNIKTITLNNYQTPKLPNS
YTQSDDNFQIGGPLHAHSVLHSFFVERGKGYQKGISSPSLSRTHCSRLSPYLAWGNISLK
QVYQMAIDEYHSKHPDKKGWKRPLAAFVSRLHWHCHFMQKFESECTMEFKALNPGYHEFP
YRDDANVKSDIERWAQGQTGIPIIDACMRCLKATGYINFRMRAMLVSFVTHHLNISWQQA
SFPLANYFLDFEPGIHYPQIQMQASVTGINTIRHYNPIKQSEDQDPTGAFIKKWCPELEK
LPIEYLHEPWQQTPMEALFNDFKLGEDYPEPMLNLTDASKQARERLWQYRERADVKRAIP
NILKRHVGLTRTIQQKAKSAKHGA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaaaaataaacatagtgtggtttaaacgcgatttacgcttatcagatcacctt
ccactaaaacatgcctttaatagcgatataccaacgctgcttatttataactttgagccg
ctcatgcttgaggatgcgcattataacgagcggcattggcgctttgtttatcaatcaatc
acacaaataaacagccaattagagcgctttaacgccacactttatatttttagccaagac
atgcttactcttttaaatgcgctcaataaaacatatcaaataataaacttatacagccat
caagaaattggcttaaataatacctttgagcgagataaagccgttaccacgtggtgtaaa
gagcaacaggtacactggcaagaatcaaaaacgggcgctgttattcgtggcaaaaaaaat
cgaagtaattggaacgaacgctggcaaaaaacaatgcaggctcctgttgctattcctaat
tggaaaaatataaaaaccattacacttaataactaccaaacacccaaattgcccaacagc
tacacgcaaagcgatgacaactttcaaataggtgggccattacacgcccatagtgtatta
cacagtttttttgtagagcgcggcaaggggtatcaaaaaggaatatctagcccaagttta
agccgtactcattgctctaggctctcaccctatttagcatggggtaatattagccttaaa
caggtgtaccaaatggctattgatgaataccattcaaaacaccctgataaaaaaggctgg
aaacgcccgctcgctgcttttgtatcgcgattgcattggcattgccactttatgcaaaag
tttgaaagtgaatgcactatggagtttaaagcattaaatccaggctaccatgagtttccc
tacagagatgacgctaatgtaaaaagcgatattgagcgctgggcacaaggccaaacgggt
attcctattattgatgcctgtatgcgctgcttaaaagcaacgggttatattaattttaga
atgcgcgctatgttagtcagctttgtaacacatcatttaaatataagttggcagcaggca
agttttccactggcaaattactttttagattttgaacctggaattcactacccgcaaata
caaatgcaggcatcggtaacgggtattaataccattaggcattacaacccgattaagcag
tctgaagatcaagacccaaccggcgcctttataaaaaagtggtgccccgaacttgaaaaa
ctgccaatagaatatttacacgagccttggcaacaaacaccaatggaagcattatttaac
gactttaaattaggagaagattacccagaacccatgctcaatttaaccgatgcttcaaag
caagctcgcgaacgcttgtggcaataccgcgagcgagcagacgttaagcgtgctattcct
aatatattaaaaagacacgtagggcttactcgcacaatacaacaaaaagcaaagagtgct
aaacatggcgcataa
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