Pseudoalteromonas espejiana: PESP_a1220
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Entry
PESP_a1220 CDS
T04989
Symbol
ffh
Name
(GenBank) signal recognition particle subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pea
Pseudoalteromonas espejiana
Pathway
pea02024
Quorum sensing
pea03060
Protein export
pea03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PESP_a1220 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PESP_a1220 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PESP_a1220 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pea02044
]
PESP_a1220 (ffh)
Enzymes [BR:
pea01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PESP_a1220 (ffh)
Secretion system [BR:
pea02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PESP_a1220 (ffh)
Eukaryotic Sec-SRP protein
PESP_a1220 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
CbiA
cobW
AAA_33
KTI12
AAA_31
APS_kinase
AAA_26
YqeC
TsaE
AAA_24
SpoU_sub_bind_like
ATP_bind_1
AAA_14
AAA_16
ABC_tran
PRP9_N
FliD_C
CGDB
Thymidylate_kin
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ASM49366
LinkDB
All DBs
Position
I:1174848..1176227
Genome browser
AA seq
459 aa
AA seq
DB search
MFENLQERLGKTLKNISGRGRLTEDNIKDTLREVRMAFLEADVALPVVREFVKQVKERAV
GVEVTKSLSPGQVFIKIVREELEKAMGEANEELSLNAQPPAVVMMAGLQGAGKTTSVGKL
AKFLKERKKKSVLVVSADVYRPAAIKQLETLATEVDVDFFPSDISQKPVDIATAAISHAK
KKFIDVVLVDTAGRLHVDNEMMGEIKDLHKAINPIETLFVVDAMTGQDAANTAKAFDEAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFMGVGERTDALEPFHPDRIASRILGMGDV
LSLIEEVEMKVDKEQAAKVAQKVFKGDGFTLDDFAEQLKQMKNMGGMMSMLDKLPGMQNL
PDAVKGQMGDKTFVQMEAIISSMTKKERARPEIIKGSRKKRIAAGSGTQVQEINKLLKQF
TQMQKMMKKMKGKGGMQKMMRGMKGMLPPGMMGGGGPKF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacctccaagaacgattaggtaaaaccttaaaaaatattagtggccgcggc
cgtttaacagaagacaacatcaaagatacgttacgcgaagtgcgtatggcatttttagaa
gctgacgttgccttacctgttgttcgcgagtttgtgaagcaagttaaagaacgtgccgtt
ggcgttgaagtgacaaaaagcttaagcccaggccaagtatttataaaaatagtgcgtgaa
gagcttgaaaaggcaatgggtgaagcgaacgaagagctaagcctaaatgcacaaccgccg
gccgttgttatgatggcgggtctgcaaggtgctggtaaaaccaccagtgtgggtaaactt
gctaagtttttaaaagagcgtaaaaagaaatctgttttagttgtaagtgccgacgtatat
cgccctgcggcgataaaacagctagaaacactagcaactgaagtcgatgttgattttttc
ccaagtgatatttcgcaaaagccggttgatatagctacagcggctatttcgcatgctaaa
aagaagtttatagatgtagttcttgttgataccgcaggccgtttgcacgtagacaacgaa
atgatgggcgaaattaaagacctgcataaagcaatcaacccaatcgaaaccttgtttgtt
gttgatgcgatgacaggtcaagatgcggctaacactgcaaaagcgtttgacgaagcgctc
cctttaacaggtgttattttaacaaaaaccgatggtgatgcccgaggtggtgcagcgcta
tctattcgtcatattaccggtaagccaattaagtttatgggtgtgggcgagcgtacggat
gcactagagccattccatcctgaccgtatagcttcgcgtattttaggtatgggcgatgta
ctttcattaatcgaagaagtcgaaatgaaagttgataaagagcaagcagctaaagttgct
caaaaagtatttaaaggcgatggttttacgcttgatgattttgctgagcaacttaagcaa
atgaaaaacatgggcggcatgatgtcgatgctcgataagctccctggtatgcaaaacctt
cctgatgctgtaaaagggcaaatgggcgataaaacttttgtacaaatggaagcaattatt
agctcaatgactaaaaaagagcgcgcacgcccagaaattattaaagggtcacgcaaaaag
cgtattgcagcgggttctggtacgcaagtgcaagagatcaataagctgctaaaacagttt
acgcaaatgcaaaaaatgatgaaaaagatgaaaggtaaaggcggcatgcaaaaaatgatg
cgcggcatgaaaggcatgttaccccctggaatgatgggtggcggtggccctaaattttaa
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